Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110503881 |
| gene name | LOC106612827 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 17217976 ~ 17233704 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| T-complex protein 1 subunit zeta-like |
| id | description |
|---|---|
| K09498 | CCT6; T-complex protein 1 subunit zeta |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021582497.2 | True | 2029 | mRNA | 0.50 | 14 | 17217976 | 17233704 |
17,202,000
17,204,000
17,206,000
17,208,000
17,210,000
17,212,000
17,214,000
17,216,000
17,218,000
17,220,000
17,220,000
17,222,000
17,224,000
17,226,000
17,228,000
17,230,000
17,232,000
17,234,000
17,236,000
17,238,000
NC_048588.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503883 | LOC106581053 | coding | upstream | 7585 | 17202026 ~ 17210391 (+) |
| LOC110503874 | LOC106612834 | coding | upstream | 386422 | 16799736 ~ 16831554 (+) |
| LOC110503873 | mettl16 | coding | upstream | 419737 | 16763694 ~ 16798239 (+) |
| LOC110503872 | lis1a | coding | upstream | 455912 | 16675447 ~ 16762064 (+) |
| LOC110503870 | LOC106612837 | coding | upstream | 543101 | 16648953 ~ 16674875 (+) |
| LOC110503886 | LOC106612826 | coding | downstream | 12911 | 17246615 ~ 17269750 (+) |
| LOC100642186 | LOC100642186 | coding | downstream | 56068 | 17289772 ~ 17290398 (+) |
| LOC110503458 | cldy | coding | downstream | 69462 | 17303166 ~ 17305135 (+) |
| LOC110503888 | LOC106612819 | coding | downstream | 72837 | 17306541 ~ 17307872 (+) |
| LOC118944098 | LOC106612921 | coding | downstream | 77228 | 17310932 ~ 17320892 (+) |
| G1907126 | NA | non-coding | upstream | 193140 | 17021188 ~ 17024836 (+) |
| G1907118 | NA | non-coding | upstream | 202923 | 17013778 ~ 17015053 (+) |
| G1907112 | NA | non-coding | upstream | 222924 | 16993509 ~ 16995052 (+) |
| G1907050 | NA | non-coding | upstream | 301241 | 16891814 ~ 16916735 (+) |
| G1907024 | LOC105031346 | non-coding | upstream | 377224 | 16840195 ~ 16840752 (+) |
| G1907216 | NA | non-coding | downstream | 6517 | 17240221 ~ 17315344 (+) |
| G1907238 | NA | non-coding | downstream | 37343 | 17271047 ~ 17271347 (+) |
| G1907257 | LOC106581067 | non-coding | downstream | 91967 | 17325671 ~ 17328934 (+) |
| G1907381 | NA | non-coding | downstream | 278215 | 17511919 ~ 17531753 (+) |
| G1907447 | NA | non-coding | downstream | 340687 | 17574391 ~ 17574683 (+) |
| G1906824 | NA | other | upstream | 795882 | 16420898 ~ 16422094 (+) |
| G1905925 | NA | other | upstream | 1964189 | 15252459 ~ 15253787 (+) |
| LOC110503347 | LOC106612880 | other | upstream | 2494094 | 14721462 ~ 14729123 (+) |
| G1904704 | LOC106612894 | other | upstream | 2912497 | 14305187 ~ 14305479 (+) |
| G1904683 | NA | other | upstream | 2948276 | 14269284 ~ 14269700 (+) |
| G1907362 | NA | other | downstream | 204376 | 17438080 ~ 17481230 (+) |
| LOC110503898 | LOC106612918 | other | downstream | 444202 | 17672206 ~ 17678960 (+) |
| G1909085 | NA | other | downstream | 865678 | 18099382 ~ 18106291 (+) |
| LOC110503911 | nek8 | other | downstream | 868250 | 18090022 ~ 18110579 (+) |
| G1909262 | NA | other | downstream | 1216990 | 18450694 ~ 18453707 (+) |
