LOC110503896 (LOC106612812)


Basic Information

Item Value
gene id LOC110503896
gene name LOC106612812
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 17640378 ~ 17658271 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021582520.2
TGCAGATGCACATCTATATCACGTGATTTGTTCTAAGCCTGCCACACATTTCTTGTAAATCACTCTGCTCTACAGTGTGCTGTTAATCCCTCCCCCTATTGGACAACTGGTTGTCAACTGAATGCTTTTTGTTgttaatatatgcacaaactgtctCTTCAGAAGATTTAAAGTCCATGCCCCTTGAAACTCATTGGCTGAATTGAAATATGACCTAGGGAAACAATGTCATCATTACATTGTTGTTCGTATAAAAGCTGATGGGTAGAGACAAGATTTGAACTTGATTCCAGATTTCAATAATCTCGTAGACCAGGATTTACAGTATCATCACCGTGGGATGGCTTCCAATAGCTGTAAAAGCAAAGTTCTTTTGAATGTGCTTTCCTATCTTGACTACAAGACAGGAAAATTCATAATTGTAGGAAGCAAGAGAGTCGGCAGTTTGTACAGAGTTATACAATTATCCATCATTGGATACCTTGTTGGGTATGTATTCCTGAGCAAGAAGTCCTACCAGACCAAAGAGGAATCTATCCAGAGTACTGTGATGACCAAACTGAAGGGAGTGGCGGTCACCAACACATCAGAGTTCGGACGGATGGTGTGGGGACCTGTGGACTATGTCATTCCACCCCAGGGGGAAGCAGTTTTTTTCATTGTTACCAATTTTATAGAGACACCAAACCAGAAGTTGGGCCACTGTGCTGAGAGCCCCAATGTGCCAGATGGCCACTGTAAGGGAGATGAAGACTGTGCAGAGGGAGAGTTGGTGGTAGCTGGCCATGGAGTTAGGACAGGCCGCTGCTTGAGAGACAATGGGAAATCCAATGGTACATGTGAGATATATAGCTGGTGCCCCGTTGAGAGAAGATGCCAACCACAGGATAGACATAAGCACACGAATATGTTAAGAGAAGCTGAAAACTTCACCATCTACATAAAAAATGTCATCCGATTTCCCAAATTCAGTTTCTCAAAGGCCAACGTTCAGGACACGGCTGATAAATTCCATCTGAAGAAATGTCGCTACGATGAGGCTCTTGAACCCTACTGCCCCATATTCCGTCTGGGAGACATTGTTAACCAAACTGGACACAGCTTTCAGGACATGGCTTTGAAGggtggTTTAATTGGAATTCTGATTGGGTGGGAGTGCGACCTTGACAGAGATCCCTCAGAATGCCAGCCACGGTACGACTTTACTCACATTGATGTTAATGTATCCAGAGAGTCCTCAGGATTCAacttcagACATGCTCGCTATTTTAAAACTGGGTCTGGAGAAAGCTACCGAACACATTTCAAAGTGTTTGGTATACGCATCAACATTATGGTGCATGGGAAGGCTGGAAAGTTCTGTATCATACCCACCATTATCCATATAGGCTCAGGACTAGCTTGTATTGGTGGTGGGGCCTGGTTCTGTGACTGGATTCTTCTTTACCTGATGAAAAATAGGGAGTTCTATAAGGACTGGaagtttgaaaatgtgaagaaTAGTACTACAGAGGATATAAAACAAACCCCAGAGGAGCAGCAGCTCACTGACCTATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCA
>XM_021582518.2
AACTTACACCTGTGACCTGCAGATGCACATCTATATCACGTGATTTGTTCTAAGCCTGCCACACATTTCTTGTAAATCACTCTGCTCTACAGTGTGCTGTTAATCCCTCCCCCTATTGGACAACTGGTTGTCAACTGAATGCTTTTTGTTgttaatatatgcacaaactgtctCTTCAGAAGATTTAAAGTCCATGCCCCTTGAAACTCATTGGCTGAATTGAAATATGACCTAGGGAAACAATGTCATCATTACATTGTTGTTCGTATAAAAGCTGATGGGTAGAGACAAGATTTGAACTTGATTCCAGATTTCAATAATCTCGTAGACCAGGATTTACAGTATCATCACCGTGGGATGGCTTCCAATAGCTGTAAAAGCAAAGTTCTTTTGAATGTGCTTTCCTATCTTGACTACAAGACAGGAAAATTCATAATTGTAGGAAGCAAGAGAGTCGGCAGTTTGTACAGAGTTATACAATTATCCATCATTGGATACCTTGTTGGGTATGTATTCCTGAGCAAGAAGTCCTACCAGACCAAAGAGGAATCTATCCAGAGTACTGTGATGACCAAACTGAAGGGAGTGGCGGTCACCAACACATCAGAGTTCGGACGGATGGTGTGGGGACCTGTGGACTATGTCATTCCACCCCAGGGGGAAGCAGTTTTTTTCATTGTTACCAATTTTATAGAGACACCAAACCAGAAGTTGGGCCACTGTGCTGAGTTGTGGGGTATTGTTCCACAGAGCCCCAATGTGCCAGATGGCCACTGTAAGGGAGATGAAGACTGTGCAGAGGGAGAGTTGGTGGTAGCTGGCCATGGAGTTAGGACAGGCCGCTGCTTGAGAGACAATGGGAAATCCAATGGTACATGTGAGATATATAGCTGGTGCCCCGTTGAGAGAAGATGCCAACCACAGGATAGACATAAGCACACGAATATGTTAAGAGAAGCTGAAAACTTCACCATCTACATAAAAAATGTCATCCGATTTCCCAAATTCAGTTTCTCAAAGGCCAACGTTCAGGACACGGCTGATAAATTCCATCTGAAGAAATGTCGCTACGATGAGGCTCTTGAACCCTACTGCCCCATATTCCGTCTGGGAGACATTGTTAACCAAACTGGACACAGCTTTCAGGACATGGCTTTGAAGggtggTTTAATTGGAATTCTGATTGGGTGGGAGTGCGACCTTGACAGAGATCCCTCAGAATGCCAGCCACGGTACGACTTTACTCACATTGATGTTAATGTATCCAGAGAGTCCTCAGGATTCAacttcagACATGCTCGCTATTTTAAAACTGGGTCTGGAGAAAGCTACCGAACACATTTCAAAGTGTTTGGTATACGCATCAACATTATGGTGCATGGGAAGGCTGGAAAGTTCTGTATCATACCCACCATTATCCATATAGGCTCAGGACTAGCTTGTATTGGTGGTGGGGCCTGGTTCTGTGACTGGATTCTTCTTTACCTGATGAAAAATAGGGAGTTCTATAAGGACTGGaagtttgaaaatgtgaagaaTAGTACTACAGAGGATATAAAACAAACCCCAGAGGAGCAGCAGCTCACTGACCTATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCA
>XM_021582519.2
ATCTGTTATTGACTCATGTTTCTCCTCCATGTCATCGCCAGTAAAACCAGTAACAAAAGCATCCCTGCCTTTCAAAACGTGGGTCTCATGCAAAAGCAGAAATCGTTCACATTCTATTTTGTACTGTTGTTTTGTACAGAACATCATAGGATGTGGGAAAATTTTGCATCAACTTACACCTGTGACCTGCAGATGCACATCTATATCACGTGATTTGTTCTAAGCCTGCCACACATTTCTTGTAAATCACTCTGCTCTACAGTGTGCTGTTAATCCCTCCCCCTATTGGACAACTGGTTGTCAACTGAATGCTTTTTGTTgttaatatatgcacaaactgtctCTTCAGAAGATTTAAAGTCCATGCCCCTTGAAACTCATTGGCTGAATTGAAATATGACCTAGGGAAACAATGTCATCATTACATTGTTGTTCGTATAAAAGCTGATGGGTAGAGACAAGATTTGAACTTGATTCCAGATTTCAATAATCTCGTAGACCAGGATTTACAGTATCATCACCGTGGGATGGCTTCCAATAGCTGTAAAAGCAAAGTTCTTTTGAATGTGCTTTCCTATCTTGACTACAAGACAGGAAAATTCATAATTGTAGGAAGCAAGAGAGTCGGCAGTTTGTACAGAGTTATACAATTATCCATCATTGGATACCTTGTTGGGTATGTATTCCTGAGCAAGAAGTCCTACCAGACCAAAGAGGAATCTATCCAGAGTACTGTGATGACCAAACTGAAGGGAGTGGCGGTCACCAACACATCAGAGTTCGGACGGATGGTGTGGGGACCTGTGGACTATGTCATTCCACCCCAGGGGGAAGCAGTTTTTTTCATTGTTACCAATTTTATAGAGACACCAAACCAGAAGTTGGGCCACTGTGCTGAGTTGTGGGGTATTGTTCCACAGAGCCCCAATGTGCCAGATGGCCACTGTAAGGGAGATGAAGACTGTGCAGAGGGAGAGTTGGTGGTAGCTGGCCATGGAGTTAGGACAGGCCGCTGCTTGAGAGACAATGGGAAATCCAATGGTACATGTGAGATATATAGCTGGTGCCCCGTTGAGAGAAGATGCCAACCACAGGATAGACATAAGCACACGAATATGTTAAGAGAAGCTGAAAACTTCACCATCTACATAAAAAATGTCATCCGATTTCCCAAATTCAGTTTCTCAAAGGCCAACGTTCAGGACACGGCTGATAAATTCCATCTGAAGAAATGTCGCTACGATGAGGCTCTTGAACCCTACTGCCCCATATTCCGTCTGGGAGACATTGTTAACCAAACTGGACACAGCTTTCAGGACATGGCTTTGAAGggtggTTTAATTGGAATTCTGATTGGGTGGGAGTGCGACCTTGACAGAGATCCCTCAGAATGCCAGCCACGGTACGACTTTACTCACATTGATGTTAATGTATCCAGAGAGTCCTCAGGATTCAacttcagACATGCTCGCTATTTTAAAACTGGGTCTGGAGAAAGCTACCGAACACATTTCAAAGTGTTTGGTATACGCATCAACATTATGGTGCATGGGAAGGCTGGAAAGTTCTGTATCATACCCACCATTATCCATATAGGCTCAGGACTAGCTTGTATTGGTGGTGGGGCCTGGTTCTGTGACTGGATTCTTCTTTACCTGATGAAAAATAGGGAGTTCTATAAGGACTGGaagtttgaaaatgtgaagaaTAGTACTACAGAGGATATAAAACAAACCCCAGAGGAGCAGCAGCTCACTGACCTATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCA
>XM_021582522.2
ATCTGTTATTGACTCATGTTTCTCCTCCATGTCATCGCCAGTAAAACCAGTAACAAAAGCATCCCTGCCTTTCAAAACGTGGGTCTCATGCAAAAGCAGAAATCGTTCACATTCTATTTTGTACTGTTGTTTTGTACAGAACATCATAGGATGTGGGAAAATTTTGCATCAACTTACACCTGTGACCTGCAGATGCACATCTATATCACGTGATTTGTTCTAAGCCTGCCACACATTTCTTGTAAATCACTCTGCTCTACAGTGTGCTGTTAATCCCTCCCCCTATTGGACAACTGGTTGTCAACTGAATGCTTTTTGTTgttaatatatgcacaaactgtctCTTCAGAAGATTTAAAGTCCATGCCCCTTGAAACTCATTGGCTGAATTGAAATATGACCTAGGGAAACAATGTCATCATTACATTGTTGTTCGTATAAAAGCTGATGGGTAGAGACAAGATTTGAACTTGATTCCAGATTTCAATAATCTCGTAGACCAGGATTTACAGTATCATCACCGTGGGATGGCTTCCAATAGCTGTAAAAGCAAAGTTCTTTTGAATGTGCTTTCCTATCTTGACTACAAGACAGGAAAATTCATAATTGTAGGAAGCAAGAGAGTCGGCAGTTTGTACAGAGTTATACAATTATCCATCATTGGATACCTTGTTGGGTATGTATTCCTGAGCAAGAAGTCCTACCAGACCAAAGAGGAATCTATCCAGAGTACTGTGATGACCAAACTGAAGGGAGTGGCGGTCACCAACACATCAGAGTTCGGACGGATGGTGTGGGGACCTGTGGACTATGTCATTCCACCCCAGGGGGAAGCAGTTTTTTTCATTGTTACCAATTTTATAGAGACACCAAACCAGAAGTTGGGCCACTGTGCTGAGTTGTGGGGTATTGTTCCACAGAGCCCCAATGTGCCAGATGGCCACTGTAAGGGAGATGAAGACTGTGCAGAGGGAGAGTTGGTGGTAGCTGGCCATGGAGTTAGGACAGGCCGCTGCTTGAGAGACAATGGGAAATCCAATGGTACATGTGAGATATATAGCTGGTGCCCCGTTGAGAGAAGATGCCAACCACAGGATAGACATAAGCACACGAATATGTTAAGAGAAGCTGAAAACTTCACCATCTACATAAAAAATGTCATCCGATTTCCCAAATTCAGTTTCTCAAAGGCCAACGTTCAGGACACGGCTGATAAATTCCATCTGAAGAAATGTCGCTACGATGAGGCTCTTGAACCCTACTGCCCCATATTCCGTCTGGGAGACATTGTTAACCAAACTGGACACAGCTTTCAGGACATGGCTTTGAAGggtggTTTAATTGGAATTCTGATTGGGTGGGAGTGCGACCTTGACAGAGATCCCTCAGAATGCCAGCCACGACATGCTCGCTATTTTAAAACTGGGTCTGGAGAAAGCTACCGAACACATTTCAAAGTGTTTGGTATACGCATCAACATTATGGTGCATGGGAAGGCTGGAAAGTTCTGTATCATACCCACCATTATCCATATAGGCTCAGGACTAGCTTGTATTGGTGGTGGGGCCTGGTTCTGTGACTGGATTCTTCTTTACCTGATGAAAAATAGGGAGTTCTATAAGGACTGGaagtttgaaaatgtgaagaaTAGTACTACAGAGGATATAAAACAAACCCCAGAGGAGCAGCAGCTCACTGACCTATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCAGCTCACTGACCCATCGCCTGAGGTTTAACACCATGGCAGCA

Function

NR:

description
P2X purinoceptor 5-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021582520.2 False 1788 mRNA 0.45 13 17640378 17658084
XM_021582518.2 False 1826 mRNA 0.45 13 17640378 17658101
XM_021582519.2 False 1955 mRNA 0.44 14 17640378 17658271
XM_021582522.2 True 1936 mRNA 0.45 13 17640378 17658271
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110503892 LOC106612816 coding downstream 90885 17533121 ~ 17549493 (-)
LOC110503890 LOC106581067 coding downstream 310955 17325594 ~ 17329423 (-)
LOC110503457 LOC106612822 coding downstream 358853 17279898 ~ 17281525 (-)
LOC118944080 LOC106612823 coding downstream 361854 17277554 ~ 17278524 (-)
LOC110503887 LOC106612825 coding downstream 363897 17274422 ~ 17276481 (-)
itgae.2 itgae coding upstream 187 17658458 ~ 17671274 (-)
LOC110503899 LOC106612809 coding upstream 42034 17700305 ~ 17716362 (-)
LOC110503901 LOC106612808 coding upstream 80917 17739188 ~ 17814508 (-)
LOC110503902 LOC106612804 coding upstream 167921 17826192 ~ 17831204 (-)
LOC110503459 LOC106612753 coding upstream 177668 17835939 ~ 17837025 (-)
G1908812 NA non-coding downstream 12249 17627929 ~ 17628129 (-)
G1908811 NA non-coding downstream 14174 17625936 ~ 17626204 (-)
G1908804 NA non-coding downstream 24238 17615927 ~ 17616140 (-)
G1908803 NA non-coding downstream 24883 17615257 ~ 17615495 (-)
G1908792 NA non-coding downstream 55589 17584524 ~ 17584789 (-)
G1908831 rrp8 non-coding upstream 32810 17691081 ~ 17691428 (-)
G1908832 NA non-coding upstream 33290 17691561 ~ 17692283 (-)
G1908786 NA non-coding upstream 69010 17727281 ~ 17727534 (-)
G1908849 NA non-coding upstream 73861 17732132 ~ 17732349 (-)
G1908874 NA non-coding upstream 112923 17771194 ~ 17776860 (-)
G1907951 NA other downstream 1479152 16158846 ~ 16161226 (-)
G1907922 NA other downstream 1507816 16131990 ~ 16132562 (-)
LOC110503846 NA other downstream 1596073 16036987 ~ 16044740 (-)
G1906218 NA other downstream 2127285 15512359 ~ 15513093 (-)
LOC110503924 LOC107554284 other upstream 773753 18432024 ~ 18434798 (-)
LOC110503944 LOC106612932 other upstream 1309791 18968062 ~ 19185772 (-)
G1910398 NA other upstream 1502178 19160449 ~ 19162158 (-)
G1910539 NA other upstream 1674570 19332841 ~ 19333225 (-)
G1910651 NA other upstream 1832446 19490717 ~ 19491608 (-)

Expression

LOC110503896(LOC106612812) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
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LOC110503896(LOC106612812) Expression in each Bioproject

Bar chart with 20 bars.
LOC110503896(LOC106612812) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network