LOC110503459 (LOC106612753)


Basic Information

Item Value
gene id LOC110503459
gene name LOC106612753
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 17835939 ~ 17837025 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021581797.2
ttaTCTATTGCTCGAAAGTTAACATGATTTCATGTTTAAATGTCATCCTTTGTGACATGTTTATGAAATGCAATTACTGTACATAACTTCTTGTTATTGGCTATTTCATTGTGTGATTATGGCTGACAACAATACAACAGCTGCAGATGGTGGTAGCAGCTCCTCTCTGCAACAAGTTAATGACATGATCATAATAGTCCAGGTGATGAATGCAATCTTCATTTACATCATCTGCCTGCTCATCTTCACCTTCTTCAAAAAGGACACCTTTCTCTCAAACACACGTTATATTTTCTTTGCTCACACACTGCTAGTTGACTGTCTGTACCTAATCATGACTAATAACTTGCTCCTCCTGACTTACTTTAGTGTCACCATGccagctgctgtgtgtgttttcttctgTGTGTTGCTTTGTGAGTTGACCTTTGTCACGCCGCTGACACTGACAGCCATGAGCCTGGAGCGGTATGTGGCCATCTGCATGCCCCTGCGCCATGGAGAGCTCTCCACTGTACGCAGAGCCATTCACTGCATCCTACTCATCCACAGCATCAGCGCCATACAGCCCATCATAATTGTCTCCATCTTCTTTGCCTCAGTCCCTCTGGGCTTCTACACGCAGTATAAGCTGTGTTCAGCAGATATGTTTATTGCACACAAGTGGCAGAGACACCTTAGATCAGTTATAGGTCAGTTCTACTTTCTGGCCATGTCCATCACCATTGTGTTTACCTATGTTAGAATAATTGCAGTGGCCAAAGAATCTTCGGACAATAAGAAATCTTTATCTAAATGTCGTAAAACGGTGATTCTCCACGCTATCCAGTTGTTCCTGTGTCTGATCCAGCTGTGGTGCCCGTTCATTGAGGCTGCCATCCTGCCAATTCATTTGAAATTGTACAATGTGAGATTCtttgattacattgtttttattCTGGCCCCGCGATGTCTTTGTCCACTTGTCTATGGCCTAAGGGATGAAAAGTTTTTCCTTGCAATTAAATGTTATGTATTTTTTGGGGTGAATAAGAACATTTCCCCAATACTTGTTGATAACTTAATTACTGGTCATATGAAAACATAA

Function

NR:

description
olfactory receptor 4N2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021581797.2 True 1087 mRNA 0.42 1 17835939 17837025

Neighbor

gene id symbol gene type direction distance location
LOC110503902 LOC106612804 coding downstream 4735 17826192 ~ 17831204 (-)
LOC110503901 LOC106612808 coding downstream 21431 17739188 ~ 17814508 (-)
LOC110503899 LOC106612809 coding downstream 119577 17700305 ~ 17716362 (-)
itgae.2 itgae coding downstream 164665 17658458 ~ 17671274 (-)
LOC110503896 LOC106612812 coding downstream 177668 17640378 ~ 17658271 (-)
LOC118943999 LOC106612753 coding upstream 5683 17842708 ~ 17843664 (-)
LOC118944000 LOC106612753 coding upstream 12448 17849473 ~ 17850429 (-)
wu:fc27b11 NA coding upstream 18265 17855290 ~ 17859396 (-)
LOC110503460 NA coding upstream 86699 17923724 ~ 17926934 (-)
LOC110503905 LOC106612802 coding upstream 126233 17963258 ~ 18015869 (-)
G1908874 NA non-coding downstream 59079 17771194 ~ 17776860 (-)
G1908849 NA non-coding downstream 103590 17732132 ~ 17732349 (-)
G1908786 NA non-coding downstream 108405 17727281 ~ 17727534 (-)
G1908832 NA non-coding downstream 143656 17691561 ~ 17692283 (-)
G1908831 rrp8 non-coding downstream 144511 17691081 ~ 17691428 (-)
G1908929 NA non-coding upstream 114 17837139 ~ 17844116 (-)
G1908932 NA non-coding upstream 10906 17847931 ~ 17854106 (-)
G1908996 NA non-coding upstream 96950 17933975 ~ 17934581 (-)
G1908999 NA non-coding upstream 100688 17937713 ~ 17948050 (-)
LOC118944080 LOC106612823 other downstream 557529 17277554 ~ 17278524 (-)
G1907951 NA other downstream 1674713 16158846 ~ 16161226 (-)
G1907922 NA other downstream 1703377 16131990 ~ 16132562 (-)
LOC110503846 NA other downstream 1791634 16036987 ~ 16044740 (-)
G1906218 NA other downstream 2322846 15512359 ~ 15513093 (-)
LOC110503924 LOC107554284 other upstream 594999 18432024 ~ 18434798 (-)
LOC110503944 LOC106612932 other upstream 1131037 18968062 ~ 19185772 (-)
G1910398 NA other upstream 1323424 19160449 ~ 19162158 (-)
G1910539 NA other upstream 1495816 19332841 ~ 19333225 (-)
G1910651 NA other upstream 1653692 19490717 ~ 19491608 (-)

Expression


Co-expression Network