LOC118944000 (LOC106612753)


Basic Information

Item Value
gene id LOC118944000
gene name LOC106612753
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 17849473 ~ 17850429 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961082.1
ATGGCTGACAACGATACAACAGCTGCAGATGGTGGTAGCAGCTCCTCTCTTCAACAAGTTAATGACAGGATCATAATAGTCCAGGTGATGAATGCAATCTTCATTTACATCATCTGCCTGCTCATCTTCACCTTCTTCAAAAAGGACACCTTTCTCTCAAACACACGTTATATTTTCTTTGCTCACACACTGCTGGTTGACTGTCTGTACCTAATCATGACTAATAACTTGCTCCTCCTGACTTACTTTAGTGTCACCATGccagctgctgtgtgtgttttcttctgTGTGTTGCTTTGTGAGTTGACCTTTGTCACGCCGCTGACACTGACAGCCATGAGCCTGGAGCGATATGTGGCCATCTGCATGCCCCTGCGCCATGGAGAGCTCTCCACTGTACGCAGAGCCATTCACTGCATCCTACTCATCCACAGCATCAGTGCCATACAGCCCATCATAATTGTCTCCATCTTCTTTGCCTCAGTCCCTCTGGGCTTCTACACGCAGTATAAGCTGTGTTCAGCAGAGATGTTTATTGCACACAAGTGGCAGAGACACCTTAGATCAGTTATAGGTCAGTTCTACTTTCTGGTCATGTCCATCACCATTGTGTTAACCTATGTTAGAATAATTGCAGTGGCCAAAGAAGCTTCGGAAAATAAGAAATCTTTATCTAAATGTCGTAAAACGGTGATTCTCCACGCTATCCAGTTGTTCCTGTGTCTGATCCAGCTGTGGTGCCCGTTCATTGAGGCTGCCATCCTGCCAATTAATTTGAAATTGTACAATAATGTGAGATTCtttgattacattgtttttattCTGGCCCCGCGATGTCTTTGTCCACTTGTCTATGGCCTAAGGGATGAAAAGTTTTTCCTTGCAATTAAATATTATGTATTTTTTGGGGTGAATAAGAACATTTCCCCAATAATTACTGGTCATATGAAAACATAA

Function

NR:

description
olfactory receptor 4N4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961082.1 True 957 mRNA 0.43 1 17849473 17850429

Neighbor

gene id symbol gene type direction distance location
LOC118943999 LOC106612753 coding downstream 5809 17842708 ~ 17843664 (-)
LOC110503459 LOC106612753 coding downstream 12448 17835939 ~ 17837025 (-)
LOC110503902 LOC106612804 coding downstream 18269 17826192 ~ 17831204 (-)
LOC110503901 LOC106612808 coding downstream 34965 17739188 ~ 17814508 (-)
LOC110503899 LOC106612809 coding downstream 133111 17700305 ~ 17716362 (-)
wu:fc27b11 NA coding upstream 4861 17855290 ~ 17859396 (-)
LOC110503460 NA coding upstream 73295 17923724 ~ 17926934 (-)
LOC110503905 LOC106612802 coding upstream 112829 17963258 ~ 18015869 (-)
ca4 ca4 coding upstream 138800 17989229 ~ 17999629 (-)
LOC110503907 LOC106612799 coding upstream 187159 18037588 ~ 18042701 (-)
G1908929 NA non-coding downstream 5357 17837139 ~ 17844116 (-)
G1908874 NA non-coding downstream 72613 17771194 ~ 17776860 (-)
G1908849 NA non-coding downstream 117124 17732132 ~ 17732349 (-)
G1908786 NA non-coding downstream 121939 17727281 ~ 17727534 (-)
G1908832 NA non-coding downstream 157190 17691561 ~ 17692283 (-)
G1908996 NA non-coding upstream 83546 17933975 ~ 17934581 (-)
G1908999 NA non-coding upstream 87284 17937713 ~ 17948050 (-)
G1909024 NA non-coding upstream 150804 18001233 ~ 18007350 (-)
G1909345 NA non-coding upstream 201425 18051854 ~ 18052194 (-)
LOC118944080 LOC106612823 other downstream 571063 17277554 ~ 17278524 (-)
G1907951 NA other downstream 1688247 16158846 ~ 16161226 (-)
G1907922 NA other downstream 1716911 16131990 ~ 16132562 (-)
LOC110503846 NA other downstream 1805168 16036987 ~ 16044740 (-)
G1906218 NA other downstream 2336380 15512359 ~ 15513093 (-)
LOC110503924 LOC107554284 other upstream 581595 18432024 ~ 18434798 (-)
LOC110503944 LOC106612932 other upstream 1117633 18968062 ~ 19185772 (-)
G1910398 NA other upstream 1310020 19160449 ~ 19162158 (-)
G1910539 NA other upstream 1482412 19332841 ~ 19333225 (-)
G1910651 NA other upstream 1640288 19490717 ~ 19491608 (-)

Expression


Co-expression Network