wu:fc27b11


Basic Information

Item Value
gene id wu:fc27b11
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 17855290 ~ 17859396 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036962085.1
TCTGTGATCTTTGTGATATGACTTTCTTTAAGCACGTACTGATGAAACTGTCacttaatatttttttcttaaagtcTATAAACGCTCTACATTTATTCACTCTGTGATAGGGTTGGATCCTATATGCTACTTTTATTATTGTCCTGTAAATGGTTCAGTGCCTAGAATTTAGGCTGTGTGTAGAATGGGGCATAAAGGAAATTACTAGATTATAGTGATAAGGAAAACAGCATACAGTTTTGGCCTGGGTATTCACTTGCCTATAACTAATCAGAATTCCATTATGTTTACATAAAGAAGAGAATACTTCAAAATGAGAAGATCCTGCCATGGAAAAGACGACTGGGTGGACAGGAAGTGTAGAAGAGGGGAAATAACTCACAACATGCAGCAGGACACCTTCAGCTGCGGGGTCTTTGTAATGCAGATGGCCAAGGAAGTTGCACAGAACTTCCCCAACATCCACTCCCAAATTGATAAGGAACCTTCACAAAAACACATGGAGCAACTGCGAAAAGAAATGGCTGAGGATATACTAAAAATGTCTGgccggtggtggctggtccactccaggagtctgaggtgcgggaggttcctccaccCCTTCTGGACaccgagggggccccggcgtatgcTGTTCGAGCCATCCTGGACTCAAGGtgtcttcagtacctcgtggagtgggaggggtacggtccggaggagacaTTCTGGGTGGAGGACGTCTTGGACCCTTCGTTGCTGCGGgagtcaccggccttctagccatcgccgatccacttttcattttccatttgtgttgtctttgtcttacacacctggtttcagttccccaattacttgttcattatttaaccctctgttcccccatgtttgtcaGTTTgagtaattgtttattgtaatgCGGTCCGCATTTGTGGCCTTGTATTTATTACGACGTGTATTGTTATATTATTGAGTAAAATTGCTttcat
>XM_036962086.1
TTAAGCACGTACTGATGAAACTGTCacttaatatttttttcttaaagtcTATAAACGCTCTACATTTATTCACTCTGTGATAGGGTTGGATCCTATATGCTACTTTTATTATTGTCCTGTAAATGGTTCAGTGCCTAGAATTTAGGCTGTGTGTAGAATGGGGCATAAAGGAAATTACTAGATTATAGTGATAAGGAAAACAGCATACAGTTTTGGCCTGGGTATTCACTTGCCTATAACTAATCAGAATTCCATTATGTTTACATAAAGAAGAGAATACTTCAAAATGAGAAGATCCTGCCATGGAAAAGACGACTGGGTGGACAGGAAGTGTAGAAGAGGGGAAATAACTCACAACATGCAGCAGGACACCTTCAGCTGCGGGGTCTTTGTAATGCAGATGGCCAAGGAAGTTGCACAGAACTTCCCCAACATCCACTCCCAAATTGATAAGGAACCTTCACAAAAACACATGGAGCAACTGCGAAAAGAAATGGCTGAGGATATACTAAAAATGTCTGAGTTCAACAAAGCCAACAACTGCTTCATGTGTGCCACTGATAAAGAACCTGGATGTGGCCCAAAGACTGACTGGGTTGAATGTTTTGCATGCGGTGGTTCCATGTGCTGTGCCTAGGAAGGAAGATAAAATAGTTCAACAGAGTAAACACAAACTGGAAGTGCAGTCTGTGTTGTTGAAAATGTATGCTATACCCCATCCACACTGAAGTGGCTCtgaaatgtacatcaaccaggaaTAAAGAGAAAGTTAACACTGT

Function

NR:

description
PREDICTED: uncharacterized protein LOC102080104 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036962085.1 False 974 mRNA 0.44 3 17855290 17859396
XM_036962086.1 True 779 mRNA 0.40 4 17858253 17859369

Neighbor

gene id symbol gene type direction distance location
LOC118944000 LOC106612753 coding downstream 4861 17849473 ~ 17850429 (-)
LOC118943999 LOC106612753 coding downstream 11626 17842708 ~ 17843664 (-)
LOC110503459 LOC106612753 coding downstream 18265 17835939 ~ 17837025 (-)
LOC110503902 LOC106612804 coding downstream 24086 17826192 ~ 17831204 (-)
LOC110503901 LOC106612808 coding downstream 40782 17739188 ~ 17814508 (-)
LOC110503460 NA coding upstream 64328 17923724 ~ 17926934 (-)
LOC110503905 LOC106612802 coding upstream 103862 17963258 ~ 18015869 (-)
ca4 ca4 coding upstream 129833 17989229 ~ 17999629 (-)
LOC110503907 LOC106612799 coding upstream 178192 18037588 ~ 18042701 (-)
LOC110503908 LOC106612797 coding upstream 202601 18061997 ~ 18069560 (-)
G1908932 NA non-coding downstream 1184 17847931 ~ 17854106 (-)
G1908929 NA non-coding downstream 11174 17837139 ~ 17844116 (-)
G1908874 NA non-coding downstream 78430 17771194 ~ 17776860 (-)
G1908849 NA non-coding downstream 122941 17732132 ~ 17732349 (-)
G1908786 NA non-coding downstream 127756 17727281 ~ 17727534 (-)
G1908996 NA non-coding upstream 74579 17933975 ~ 17934581 (-)
G1908999 NA non-coding upstream 78317 17937713 ~ 17948050 (-)
G1909024 NA non-coding upstream 141837 18001233 ~ 18007350 (-)
G1909345 NA non-coding upstream 192458 18051854 ~ 18052194 (-)
LOC118944080 LOC106612823 other downstream 576880 17277554 ~ 17278524 (-)
G1907951 NA other downstream 1694064 16158846 ~ 16161226 (-)
G1907922 NA other downstream 1722728 16131990 ~ 16132562 (-)
LOC110503846 NA other downstream 1810985 16036987 ~ 16044740 (-)
G1906218 NA other downstream 2342197 15512359 ~ 15513093 (-)
LOC110503924 LOC107554284 other upstream 572628 18432024 ~ 18434798 (-)
LOC110503944 LOC106612932 other upstream 1108666 18968062 ~ 19185772 (-)
G1910398 NA other upstream 1301053 19160449 ~ 19162158 (-)
G1910539 NA other upstream 1473445 19332841 ~ 19333225 (-)
G1910651 NA other upstream 1631321 19490717 ~ 19491608 (-)

Expression


Co-expression Network