LOC110503460


Basic Information

Item Value
gene id LOC110503460
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 17923724 ~ 17926934 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021581798.2
TGGTGAAGATAATGTCACTGTCATGACATTACGGGTGACTTGGGTGATGCTCGTGCGTAATTAAGCATCTGGTGCGCATCATGGGGTCCAAATAAAGGAACATTTCCATATCAAAGGTCTGTTGCTTGGACATGATGCCTTGGCATTTCGACTCAAAGTCAGTAACTGACCAATTAAGGGTTTTGAGGACTGTTGAATTGCGGGAGCTTCTGCGGGATGAAGAAAAAATTAGCCAGATCATCAGATTCAGCCAAAAGTTTCAGGGGCTTCAGGGAGCAAAGGAGACTGTGTTGGTCTCCAACAGTAGATTGGCAGAGACCAGTCTCTCTCATGAGCCAGAGCTCAATACTGGTAAGCTATGGTTAGCCAAGAAGTACCAGGAACTGGAGAAATTCACCAATATCATCCAAGCCAAACAGAACCAACTTGTTTTAGTAGAGAAACAAAGCCTTCACATGGTCCAGTGGCTTCTTCTGAACAAGCTGGCCCACTCTGAAGAAGAATGTGATGCTCTCTCACAGAGATTCACAGATGGGAAAATATCCCTGGAGCATTTTGTGGAGTCATGTCAAAGATCTTGTAAGCTCTACCATATTCGTCTGGTTCAGGCAGAGAAAATCCAAGAGTTTATCAAGCCTGAACACAAACCCCAAAGGCCCACTGAGAATCACAATAGTAGGGAGCCATCAGTTTACTTCCCCCTGAGCCCCCATCCCAATATCTGCCATGTTTTCTATGGCCTCACCCCTGCTATTATTCTGCCTAATGTCTACCACTCTGTCAGCTCTGCTCCGGTCCACTTCCGGATGGGTCCATATCTACCGCCCCTGAGTGACCACATCATCAACAATGCTCAACTTATGAGGCCTGTAGCCTCACCTTTTGACACATGTCAACCTGTGGGCCTTAGAGTGTATGGAAAGGGACATGCTCCCAGGTGGCCAGCCAGGCCTGTACGTCTGCAGCGACTCAACAACATACAGTCCAGACATCTTCAGCAGGACCCACCACCACATTGACACTGTTGGGTAAAAAAAGACATCAACTGTTACTCTCTGGACTATAATGAATTTGTGTACTTtatgattgtgtctgtaaaacAGTACCCCACATGTGAAACAAGTTCATTGAGAATTGATTGACAAAAGAAACAAGTTGATTAAGAGCGTTGAAT

Function

NR:

description
vacuolar protein sorting-associated protein 37D-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021581798.2 True 1174 mRNA 0.46 4 17923724 17926934

Neighbor

gene id symbol gene type direction distance location
wu:fc27b11 NA coding downstream 64328 17855290 ~ 17859396 (-)
LOC118944000 LOC106612753 coding downstream 73295 17849473 ~ 17850429 (-)
LOC118943999 LOC106612753 coding downstream 80060 17842708 ~ 17843664 (-)
LOC110503459 LOC106612753 coding downstream 86699 17835939 ~ 17837025 (-)
LOC110503902 LOC106612804 coding downstream 92520 17826192 ~ 17831204 (-)
LOC110503905 LOC106612802 coding upstream 36324 17963258 ~ 18015869 (-)
ca4 ca4 coding upstream 62295 17989229 ~ 17999629 (-)
LOC110503907 LOC106612799 coding upstream 110654 18037588 ~ 18042701 (-)
LOC110503908 LOC106612797 coding upstream 135063 18061997 ~ 18069560 (-)
LOC110503909 LOC106612796 coding upstream 148282 18075216 ~ 18081425 (-)
G1908932 NA non-coding downstream 69618 17847931 ~ 17854106 (-)
G1908929 NA non-coding downstream 79608 17837139 ~ 17844116 (-)
G1908874 NA non-coding downstream 146864 17771194 ~ 17776860 (-)
G1908849 NA non-coding downstream 191375 17732132 ~ 17732349 (-)
G1908786 NA non-coding downstream 196190 17727281 ~ 17727534 (-)
G1908996 NA non-coding upstream 7041 17933975 ~ 17934581 (-)
G1908999 NA non-coding upstream 10779 17937713 ~ 17948050 (-)
G1909024 NA non-coding upstream 74299 18001233 ~ 18007350 (-)
G1909345 NA non-coding upstream 124920 18051854 ~ 18052194 (-)
LOC118944080 LOC106612823 other downstream 645314 17277554 ~ 17278524 (-)
G1907951 NA other downstream 1762498 16158846 ~ 16161226 (-)
G1907922 NA other downstream 1791162 16131990 ~ 16132562 (-)
LOC110503846 NA other downstream 1879419 16036987 ~ 16044740 (-)
G1906218 NA other downstream 2410631 15512359 ~ 15513093 (-)
LOC110503924 LOC107554284 other upstream 505090 18432024 ~ 18434798 (-)
LOC110503944 LOC106612932 other upstream 1041128 18968062 ~ 19185772 (-)
G1910398 NA other upstream 1233515 19160449 ~ 19162158 (-)
G1910539 NA other upstream 1405907 19332841 ~ 19333225 (-)
G1910651 NA other upstream 1563783 19490717 ~ 19491608 (-)

Expression


Co-expression Network