Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110503924 |
| gene name | LOC107554284 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 18432024 ~ 18434798 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0007017 | microtubule-based process | biological_process |
| GO:0005875 | microtubule associated complex | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0043186 | P granule | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021582576.2 | False | 1225 | mRNA | 0.43 | 3 | 18432468 | 18434772 |
| XM_036961188.1 | False | 1202 | mRNA | 0.43 | 3 | 18432468 | 18434798 |
| TU2183897 | False | 1689 | TUCP | 0.42 | 3 | 18432024 | 18434792 |
| TU2183901 | True | 1640 | TUCP | 0.42 | 3 | 18432024 | 18434792 |
18,427,000
18,428,000
18,429,000
18,430,000
18,431,000
18,432,000
18,433,000
18,434,000
18,435,000
18,436,000
NC_048588.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503921 | LOC106612790 | coding | downstream | 49278 | 18363095 ~ 18383190 (-) |
| LOC110503920 | LOC106612791 | coding | downstream | 76989 | 18311939 ~ 18355479 (-) |
| LOC110503909 | LOC106612796 | coding | downstream | 351043 | 18075216 ~ 18081425 (-) |
| LOC110503908 | LOC106612797 | coding | downstream | 362908 | 18061997 ~ 18069560 (-) |
| LOC110503907 | LOC106612799 | coding | downstream | 389767 | 18037588 ~ 18042701 (-) |
| LOC110503923 | LOC106612789 | coding | upstream | 2740 | 18437538 ~ 18447553 (-) |
| LOC110503925 | LOC106612788 | coding | upstream | 15876 | 18450674 ~ 18455598 (-) |
| LOC110503926 | LOC106612787 | coding | upstream | 19193 | 18453991 ~ 18465242 (-) |
| LOC110503927 | kiaa0100 | coding | upstream | 30601 | 18465399 ~ 18494798 (-) |
| LOC110503930 | LOC106612786 | coding | upstream | 60470 | 18495268 ~ 18501115 (-) |
| G1909483 | NA | non-coding | downstream | 21439 | 18326648 ~ 18411029 (-) |
| G1909484 | NA | non-coding | downstream | 121982 | 18309787 ~ 18310486 (-) |
| G1909496 | NA | non-coding | downstream | 143924 | 18286714 ~ 18288544 (-) |
| G1909495 | NA | non-coding | downstream | 146293 | 18283361 ~ 18286175 (-) |
| G1909470 | NA | non-coding | downstream | 164820 | 18267313 ~ 18267648 (-) |
| G1909572 | NA | non-coding | upstream | 21738 | 18456536 ~ 18457218 (-) |
| LOC110503933 | txndc17 | non-coding | upstream | 127144 | 18561930 ~ 18566131 (-) |
| G1909868 | NA | non-coding | upstream | 239281 | 18674079 ~ 18674678 (-) |
| G1909869 | NA | non-coding | upstream | 240879 | 18675677 ~ 18677393 (-) |
| G1909902 | NA | non-coding | upstream | 305267 | 18740065 ~ 18740282 (-) |
| LOC118944080 | LOC106612823 | other | downstream | 1154058 | 17277554 ~ 17278524 (-) |
| G1907951 | NA | other | downstream | 2271242 | 16158846 ~ 16161226 (-) |
| G1907922 | NA | other | downstream | 2299906 | 16131990 ~ 16132562 (-) |
| LOC110503846 | NA | other | downstream | 2388163 | 16036987 ~ 16044740 (-) |
| G1906218 | NA | other | downstream | 2919375 | 15512359 ~ 15513093 (-) |
| LOC110503944 | LOC106612932 | other | upstream | 533264 | 18968062 ~ 19185772 (-) |
| G1910398 | NA | other | upstream | 725651 | 19160449 ~ 19162158 (-) |
| G1910539 | NA | other | upstream | 898043 | 19332841 ~ 19333225 (-) |
| G1910651 | NA | other | upstream | 1055919 | 19490717 ~ 19491608 (-) |
| G1910996 | NA | other | upstream | 1256268 | 19691066 ~ 19691513 (-) |
