slc47a3


Basic Information

Item Value
gene id slc47a3
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 18757346 ~ 18764696 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961084.1
TCAGAGCTAGGGAGTGACAAAGGATGTCATCAGATAGGAAGTCTCGCTCTGGCAGCTGGCAGCTAGAATACCACCTTGTTCTCACTTGACCATGCAGACTTTTCTGAGCGACAGTCTTTAGAAATGGATTCTAATGGAATTGTGGAGAGCAGGATGAATGGGAATGAATTGACAATATGTGGGAGCTGTTTGAGATGTATTCGCAGGTTGATTCCTGTTGAATTCAAAAAAGAAATTATTGAATTATCAACAATGGCTGGGCCTGTGGTTATGGCTCAGCTCATGGTCTTTTTAGTTAGTTTCGTCAGTACAATTTTCTGTGGCCATTTGGGGAAGACAGAACTGGCAGGGGTCACTCTCGCCATAGCTGTGATTAATGTTACAGGTGTCTCCATTGGGTATGGTTTATCATCAGCTTGTGACACACTCATATCTCAGACTTTTGGGAGCCGTAACCTCTTGAAAGTTGGGGTCATTGTACAGAGAGCCATCCTCATTCAACTTCTGGCCTGTTTCCCATGCTGGGCTGTTCTCATCAACACAGAACCAATCCTCCTGGCTGTCAAACAGAGCCCAGAGGTCGCCAGGCTGTCTCAGGTGTATGTGAAGATTTTTATGCCAGCACTCCCAGCCACATTTATTTATCAGCTGGAGGCCAGATATCTACAGAATCAGGGACGAGCCTTGTGTTCCCCTGTAGGTTGGTCTTGGGAGTGCTTGGAAGACTGGGGCACCTACATCCACCTGGCTATTCCTAGCATGATCATGCTGTGTGTGGAGTGGTGGACTTATGAGATTGGAGGCTTTCTAGCAGGTCTGATAAGTGAGGTGGAGCTTGGAGCACAATCAGTCGTCTTCGAACTGGCAAGCATTTGCTACATGttcCCTCTAGGGTTCAGTGTGGCAGGCAGTGTGAGGGTGGGCAGTGCTCTGGGGGCTGGAGATACAGAGCAGGCCAAGCTGTCTGCCAAGCTGGCCATGTTCTGTGCTGGGTCCGTTTCTGTGTGCTTGTCGGTTCTTGTTGGGATACTAAAGGACAAAATCTCCTACGTCTTTACATATGATGAGCAGATCAGAGAGAGGGTTGCTCAAGTTATGGCTTTCTACGCCCCTTTTCTTCTGTTATATGCAATATCGGCTGCCTCAGGTAGTATTATAAGGGGGGCAGGGAAGCAGAAGGTTGGGGCGATATGCAACATCCTGGGTTACTATGGGGTTGGCTTTCCTATTGGAGTGTCCCTGATGTTTGCTGCCAAGCTAGGAATCATGGGCCTGTGGACCGGTCTGTTTACCTGTGTGTTCCTACAGTCCTCCTTCCTCATCGTCTATCTATCCAGAATGAACTGGAAGAAAGCCACTGTAGAGGCCCAGATCAGAGCTGGGATACAGGGGAACTCTACAGACATGGACATGGCCCCAGAGGCCCATTCAAATGATTCAGCTCCATGTGAGGGCCACAAAGACAGAAATGCCCTGGCTGAAGATGGGGCTGAGGCTGATGGTGAGGCTGGGGACAGGGTGGCCCTCAACAAGGTGGGGGCACTGCTGGCCCACAGGGCCCTGATAATGCGGAGGGCCCTGGCTCTGTGTGTCATGCTCTTCATCCTAGCCCTGGGAATCATCATCAACCTACTGCTCACCAACCTCACTTGATGAACACAGAGTGAGTTCCAGAGAAAATGTTCCAGTCTTAAAATGAATGGGTTCCAGAGATAGCTCCACTCAGTGAGAGTGGTCAGAGGACCACCTAAGCAACGAAGCAGAGAAGATAGGAGTGAAGAGGAGCTGGCCAAACTACAGTATGGTGCCAAAATTCCAGTACTGTTGGTCTGTGAGGAGCCAAGGGGTTACTAATTCTGGACCTTTTCATTAATCATCTGAATGAA

Function

NR:

description
PREDICTED: multidrug and toxin extrusion protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961084.1 True 1886 mRNA 0.49 15 18757346 18764696

Neighbor

gene id symbol gene type direction distance location
LOC110503933 txndc17 coding downstream 191215 18561930 ~ 18566131 (-)
LOC110503929 LOC106612785 coding downstream 195982 18504076 ~ 18561364 (-)
LOC110503930 LOC106612786 coding downstream 256231 18495268 ~ 18501115 (-)
LOC110503927 kiaa0100 coding downstream 262548 18465399 ~ 18494798 (-)
LOC110503926 LOC106612787 coding downstream 292104 18453991 ~ 18465242 (-)
slc13a5b LOC106612936 coding upstream 10560 18775256 ~ 18787927 (-)
LOC110503941 LOC106612935 coding upstream 24523 18789219 ~ 18794812 (-)
wdr81 wdr81 coding upstream 30558 18795254 ~ 18813800 (-)
LOC110503944 LOC106612932 coding upstream 206985 18968062 ~ 19185772 (-)
LOC118944057 NA coding upstream 632658 19397081 ~ 19398144 (-)
G1909911 NA non-coding downstream 1860 18754988 ~ 18755486 (-)
G1909902 NA non-coding downstream 17064 18740065 ~ 18740282 (-)
G1909869 NA non-coding downstream 79953 18675677 ~ 18677393 (-)
G1909868 NA non-coding downstream 82668 18674079 ~ 18674678 (-)
G1909914 NA non-coding upstream 1520 18766216 ~ 18766447 (-)
G1909915 NA non-coding upstream 1758 18766454 ~ 18766762 (-)
G1909845 NA non-coding upstream 8906 18773602 ~ 18775173 (-)
G1909924 NA non-coding upstream 46375 18811071 ~ 18811495 (-)
G1909927 NA non-coding upstream 50005 18814701 ~ 18815028 (-)
LOC110503924 LOC107554284 other downstream 322554 18432024 ~ 18434798 (-)
LOC118944080 LOC106612823 other downstream 1478936 17277554 ~ 17278524 (-)
G1907951 NA other downstream 2596120 16158846 ~ 16161226 (-)
G1907922 NA other downstream 2624784 16131990 ~ 16132562 (-)
LOC110503846 NA other downstream 2713041 16036987 ~ 16044740 (-)
G1910398 NA other upstream 395753 19160449 ~ 19162158 (-)
G1910539 NA other upstream 568145 19332841 ~ 19333225 (-)
G1910651 NA other upstream 726021 19490717 ~ 19491608 (-)
G1910996 NA other upstream 926370 19691066 ~ 19691513 (-)

Expression


Co-expression Network