slc13a5b (LOC106612936)


Basic Information

Item Value
gene id slc13a5b
gene name LOC106612936
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 18775256 ~ 18787927 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021582599.2
tctctctccatctgtctcccatcATTATATGTTTGTgagctctcttccctctcctattATCAGCTGCGGGACTCCCCCTTTCACTTCCTCCCCTCCCCGACCTGCTTGAAGTAAAACGACCGTCCCTAGTGCTCCAACTTTCTTTGCCTCTGCATCTCCTAAAGTCATAGGATGGCAGCATTTCTGAAATCCCTTCGGAATCTGAAGAATGAGATCGTTCTATTCTCTACCCCGTTACTTCTTCTCCCGCTGCCTTTAGTCATTGGAACAAAGGAGGCAGCATGTGCCTATGTGATCATCCTGATGGCAGTGTACTGGTGTACAGAGGCCTTACCTCTGGCTGTCACTGCCCTGCTCCCTGCTGTCCTCTTCCCCATGTTTGGCATCATGCAGTCCAAAGATGTGTGTATGCAGTACCTGAAGGACACCAACATGTTGTTTGTGGGAGGACTGATGGTGGCGGTGGCAGTGGAGCACTGGAACCTGCACAAACGCATTGCCCTTCGAGTGCTGCTCTTTGTAGGGGTGCGCCCCGCTCTTCTGATGCTGGGCTTCATGGGGGTGACAGCCTTCCTGTCCATGTGGATCAGTAACACAGCCACCACAGCCATGATGGTGCCCATCGTCCAGGCTGTTCTGGAGCAGCTCAACAACTACACAGAGACTGAGATGCCTGTGATCCTCAGCTCTGAGGAGGACACCCAGCCTCAGGAACCCACTGACAGcaaacagacggagaaacaggCAGAGGGACATGTTGTGGTGACCTGTTTAGACCCGTTTGTGGAGGCTATCCGGCGTAAGGAGGCTGCAGACAAGAAGAAGATGTGTAAGGGCATGACGCTGTGTGTGTGCTACGCTGCCAGCATCGGGGGCACTGCCACCCTCACAGGGACTGGCCCCAACCTGGTGCTCAAGGGACAGATGAACCAGCTGTTTCCTAACAATGGCGATGTCATCAATTTTGCGTCCTGGTTCGGCTTTGCTTTCCCCAACATGATCCTGATGCTGACCCTGGCTTGGCTCTGGCTGCAGTTTGTCTTCATGGGATTCAATTTTAAGAAGACGTGGGGCTGTGGGGAagtaaagacagagaaagagatagcTGTGTACAATGTGATCAAGGAGCAGCATCGTCAGCTGGGCTCCATGTCTTTTGGAGAGCTGAGTGTGTTGGGTCTCTTCAGTTGTCTGGTGGTTCTGTGGTTCACCAGAGATCCTGGCTTCGTGGCAGGCTGGGCCACATACATCTTCAATGCTGACGCAGAGTATGTAACTGATGCCACAGTGGCAGTGTTCATTGCTGTCCTTCTCTTCGTCCTACCTTCCAAGCCCCCACGCTTCTGTTGCAGGAGGTCCCAAAGCTTTGACACTGAGCACCAACACCCAGCTGACCCCACACCAGCTCTGCTGACCTGGAAGGTGGCCCAGAAGAAGTTACCCTGGAGCATCGTTCTCCTCTTGGGGGGAGGGTTCGCCCTGGCCAAAGGCAGCGAGGAATCAGGTCTGTCTATGTGGATGGGGGACCAGATGACTCCCCTCCACACCATCCCACCCTGGGCCATCGCTGTCATCCTGTGTCTGCTGATCGCCATCTTCACAGAGTGCACCAGTAATGTGGCCACTGCTACTCTCTTCCTACCTGTCCTCGCCTCAATGTCCCAGTCCATTGGAATGAATCCTCTGTACGTCATGGTGCCTTGTACTCTCAGTGCTTCCTTTGCCTTCATGCTACCTGTGGCCACACCGCCCAATGCTATCGTCTTCTCATACGGCTACCTCAAGGTTTCTGACATGGCTAGGACAGGTATAGTGATGAACATCATCGGCATCCTGTGCATCACTCTGGCCATCAACAGCTGGGGCAGGGCCATGTTCCACCTAGACACCTTCCCTACTTGGGCCAACACTACTGGGGTTTGAGGGCACCGAGGGGCCACGGTCCACACCATGAGGAATGCACATAGAGGGCCCCTAATGTGCCATGGACCTCTGGCGAGAAAGGCACCAACGTGACTGGTCGTGTTAGGTTGTTGGGAGAAAAGCCACATGGCTTCCATTACAAAGGACACTTGAATAACCCTGTGgaaagagaggatggatggatggatggatggatggatggatggatgggtggatggatggatggatggatggatggatggatggatggatg
>XM_036962081.1
ATCTAGGtttagccttctctctctccatctgtctcccatcATTATATGTTTGTgagctctcttccctctcctattATCAGCTGCGGGACTCCCCCTTTCACTTCCTCCCCTCCCCGACCTGCTTGAAGTAAAACGACCGTCCCTAGTGCTCCAACTTTCTTTGCCTCTGCATCTCCTAAAGTCATAGGATGGCAGCATTTCTGAAATCCCTTCGGAATCTGAAGAATGAGATCGTTCTATTCTCTACCCCGTTACTTCTTCTCCCGCTGCCTTTAGTCATTGGAACAAAGGAGGCAGCATGTGCCTATGTGATCATCCTGATGGCAGTGTACTGGTGTACAGAGGCCTTACCTCTGGCTGTCACTGCCCTGCTCCCTGCTGTCCTCTTCCCCATGTTTGGCATCATGCAGTCCAAAGATGTGTGTATGCAGTACCTGAAGGACACCAACATGTTGTTTGTGGGAGGACTGATGGTGGCGGTGGCAGTGGAGCACTGGAACCTGCACAAACGCATTGCCCTTCGAGTGCTGCTCTTTGTAGGGGTGCGCCCCGCTCTTCTGATGCTGGGCTTCATGGGGGTGACAGCCTTCCTGTCCATGTGGATCAGTAACACAGCCACCACAGCCATGATGGTGCCCATCGTCCAGGCTGTTCTGGAGCAGCTCAACAACTACACAGAGACTGAGATGCCTGTGATCCTCAGCTCTGAGGAGGACACCCAGCCTCAGGAACCCACTGACAGcaaacagacggagaaacaggCAGAGGGACATGTTGTGGTGACCTGTTTAGACCCGTTTGTGGAGGCTATCCGGCGTAAGGAGGCTGCAGACAAGAAGAAGATGTGTAAGGGCATGACGCTGTGTGTGTGCTACGCTGCCAGCATCGGGGGCACTGCCACCCTCACAGGGACTGGCCCCAACCTGGTGCTCAAGGGACAGATGAACCAGCTGTTTCCTAACAATGGCGATGTCATCAATTTTGCGTCCTGGTTCGGCTTTGCTTTCCCCAACATGATCCTGATGCTGACCCTGGCTTGGCTCTGGCTGCAGTTTGTCTTCATGGGATTCAATTTTAAGAAGACGTGGGGCTGTGGGGAagtaaagacagagaaagagatagcTGTGTACAATGTGATCAAGGAGCAGCATCGTCAGCTGGGCTCCATGTCTTTTGGAGAGCTGAGTGTGTTGGGTCTCTTCAGTTGTCTGGTGGTTCTGTGGTTCACCAGAGATCCTGGCTTCGTGGCAGGCTGGGCCACATACATCTTCAATGCTGACGCAGAGTATGTAACTGATGCCACAGTGGCAGTGTTCATTGCTGTCCTTCTCTTCGTCCTACCTTCCAAGCCCCCACGCTTCTGTTGCAGGAGGTCCCAAAGCTTTGACACTGAGCACCAACACCCAGCTGACCCCACACCAGCTCTGCTGACCTGGAAGGTGGCCCAGAAGAAGTTACCCTGGAGCATCGTTCTCCTCTTGGGGGGAGGGTTCGCCCTGGCCAAAGGCAGCGAGGAATCAGGTCTGTCTATGTGGATGGGGGACCAGATGACTCCCCTCCACACCATCCCACCCTGGGCCATCGCTGTCATCCTGTGTCTGCTGATCGCCATCTTCACAGAGTGCACCAGTAATGTGGCCACTGCTACTCTCTTCCTACCTGTCCTCGCCTCAATGggggaagatggagtgcAGGTCAGGGGAAGCTCGAGCAGGTTGCaggaaaccaggtgcggaggctgaggctggagcgagaggagttgggacaggTCCCAGTCCATTGGAATGAATCCTCTGTACGTCATGGTGCCTTGTACTCTCAGTGCTTCCTTTGCCTTCATGCTACCTGTGGCCACACCGCCCAATGCTATCGTCTTCTCAT

Function

NR:

description
solute carrier family 13 member 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021582599.2 False 2176 mRNA 0.54 12 18775256 18787910
XM_036962081.1 True 1881 mRNA 0.54 12 18775915 18787927

Neighbor

gene id symbol gene type direction distance location
slc47a3 NA coding downstream 10560 18757346 ~ 18764696 (-)
LOC110503933 txndc17 coding downstream 209125 18561930 ~ 18566131 (-)
LOC110503929 LOC106612785 coding downstream 213892 18504076 ~ 18561364 (-)
LOC110503930 LOC106612786 coding downstream 274141 18495268 ~ 18501115 (-)
LOC110503927 kiaa0100 coding downstream 280458 18465399 ~ 18494798 (-)
LOC110503941 LOC106612935 coding upstream 1292 18789219 ~ 18794812 (-)
wdr81 wdr81 coding upstream 7327 18795254 ~ 18813800 (-)
LOC110503944 LOC106612932 coding upstream 183754 18968062 ~ 19185772 (-)
LOC118944057 NA coding upstream 609427 19397081 ~ 19398144 (-)
LOC118944022 NA coding upstream 710635 19498562 ~ 19502464 (-)
G1909845 NA non-coding downstream 83 18773602 ~ 18775173 (-)
G1909915 NA non-coding downstream 8494 18766454 ~ 18766762 (-)
G1909914 NA non-coding downstream 8809 18766216 ~ 18766447 (-)
G1909911 NA non-coding downstream 19770 18754988 ~ 18755486 (-)
G1909902 NA non-coding downstream 34974 18740065 ~ 18740282 (-)
G1909924 NA non-coding upstream 23144 18811071 ~ 18811495 (-)
G1909927 NA non-coding upstream 26774 18814701 ~ 18815028 (-)
G1909930 LOC106612933 non-coding upstream 31326 18819253 ~ 18825843 (-)
G1909960 NA non-coding upstream 86796 18874723 ~ 18874925 (-)
G1909971 NA non-coding upstream 92760 18880687 ~ 18880959 (-)
LOC110503924 LOC107554284 other downstream 340464 18432024 ~ 18434798 (-)
LOC118944080 LOC106612823 other downstream 1496846 17277554 ~ 17278524 (-)
G1907951 NA other downstream 2614030 16158846 ~ 16161226 (-)
G1907922 NA other downstream 2642694 16131990 ~ 16132562 (-)
LOC110503846 NA other downstream 2730951 16036987 ~ 16044740 (-)
G1910398 NA other upstream 372522 19160449 ~ 19162158 (-)
G1910539 NA other upstream 544914 19332841 ~ 19333225 (-)
G1910651 NA other upstream 702790 19490717 ~ 19491608 (-)
G1910996 NA other upstream 903139 19691066 ~ 19691513 (-)

Expression


Co-expression Network