LOC110503941 (LOC106612935)


Basic Information

Item Value
gene id LOC110503941
gene name LOC106612935
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 18789219 ~ 18794812 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021582606.2
TCAGTCTGCAGATTTGCCAGTATGCTTTGATTCTCAAAGTGTCCGGCTCTGTCAGGCTCACTGTTTGACCCCTGAATCGGTCTCAATATTTACATTTACAAACAAGTAGTGACATATATGAAGCACAGATCAATGAAAGTTGAAGTTTAACAGCCTGCTGAGCAACTGGCAGTATTTTGCAAATGAGAACTCTGCCATTGCACGTTTAGTGTGTATGTCGCTCTCTCTTTTTAGACAGGATAGCAGGTCTCCCATCTTCATTTTGTCAAGGCTGGCTGTTCATGGACATGGACCTTCGTCTACTATCACTCCTGTTGTTCTGTGTCTGCAGACAAGGACTAACTAATGGAGAAGTGTCAAATGATGCTCCAATCCCTCTGGTCCCTCTCATCCCATTGATGCCCAGCCACCCTAAAGAGGAATCAGGGACTTCAGCCCCTAGTACACAGGAGCCTCCAAACACAAGTCCCACCTCATATACGTGCACCCCACCTCCCCTCGTGACGACCAGTGCCCCAGGTGGGAGCTCGTCTGAGGAGGATAATCAGCAGCAGGATGGGGGTTGTAGGGCCCAGGCCCGCAGGCCAAAATCCAGGCAGGCCTTAGCTGGTGCCATCCAGAGGCTGGGCATGAAGCTCTTGGGCCAGATGAAGACAGGACCTGAGCAGCCCAATGTCATCATATCCCCCCTCAGCATATCCCTGGCACTCTCCCAGCTGGCTCTGGGAGCCATGAATGAGACCGAGGAGCTGTTGATGCACCATCTCCATGGTGACACTCTGCCCTGCTACCACATGTCTCTGCACAACTTCCTGGAACGCTTCCGCAAGAGTGACCTGCAAGTGGCTACACGCCTCTACCTGCAACCAGGGTTTGAGCCCAAACCAGAGTTTGTTCATCAGTCTCAGGATGTATATGACTCAGAGCCAGTGACCTTGGAAGGGCTGGCTGAGGTCAACGAGTGGGTAGAGAGGGCCACTAATGGAAAAGTGACCGACTTCCTGACCAGTCTGCCACCCAATCTGCTTCTCATGCTCATCAATGCTGTTCACTTCAAAGGAGAATGGAAGGCTCGCTTCGACCCACGATTTACCTCCAAAGATGTCTTCTACGTTGACGACAAGCACATGGTCAATGTTGACATGATGATGGGGCCCAAATACCCCTTGAGTCTGCTCATTGATAATGATCTGGAGGCTCAGGTGGCTCGCTTCCCCTTCAAGAATCAGATGAGCCTGCTGATAGTGATGCCCATGAATGGCCAGGTGAACGTGTCAGCCCTCACAGCAAAGCTCAACATCTCTGACCTGTACAACCGCCTGCCCAGAGAGAGACCCATGCAGGTCAAGCTGCCCAAATTTAAACTGGACTACAGCCAGGACCTGCAGGAGGCTCTGACCAACATTGGTATGGGGGAATTGTTTGCTAGTCCCAACCTGGCTGCCATAGCTGAGGGCCCTCTGCTGGTGTCCAGTGTGCAGCACAAGTCTAGTATGGAGATCACTGAGGAGGGAGCAGAGGCTGCTGCAGCTACCAGCCTGGTCATCTCACGGTCCAACCCCTCTTTTAGCCTCAACCAGCCATTCTTCTTTGCCCTCATGGACGATAAGACACAAGCACCAGTCTTCCTGGGCGTCAtcaccaaccctaaccctggagcTCCTGCTATGCAGAGTAGTGGAGGGTCTGCCAACCTAGATAAAGTACACTACCCCATTGATGACAAGAATGGCAAGAATGACAAGCATTATAGTCACTCTTTTGGTGGGCCACCCAAGTAAGCCGAAACCTCATTCAATGAGGGGAGAGGTAATGGTCTTATCTATTGACCTTGAACTGTACTGCTGTCTGTCAGAGAGGAAGCAAATCCAGATGAGCAACTCAGATGTATGACAACAGCCCAAGTTATCCAAATGGTCAGCTGGATTGAAATGTAACCATTTTTCTAAAtgtgaaacttttttttttttaaatacaaatacttttttattttttctttatttttattttaaatacacaacacactgAGGTGCCCCACATTCTCTAATGAAGTTTACTGCTGATTAAAAATACTAGTATTTCTATCTGTTGTTTTGGATTAAATGTATCATGAAAATGCAATATTGTGTATTAGGCTACATGATAAGACATTAAACATGTCAAAATCC

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0005615 extracellular space cellular_component

KEGG:

id description
K03983 SERPINF2, AAP; alpha-2-antiplasmin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021582606.2 True 2168 mRNA 0.48 9 18789219 18794812

Neighbor

gene id symbol gene type direction distance location
slc13a5b LOC106612936 coding downstream 1292 18775256 ~ 18787927 (-)
slc47a3 NA coding downstream 24523 18757346 ~ 18764696 (-)
LOC110503933 txndc17 coding downstream 223088 18561930 ~ 18566131 (-)
LOC110503929 LOC106612785 coding downstream 227855 18504076 ~ 18561364 (-)
LOC110503930 LOC106612786 coding downstream 288104 18495268 ~ 18501115 (-)
wdr81 wdr81 coding upstream 442 18795254 ~ 18813800 (-)
LOC110503944 LOC106612932 coding upstream 176869 18968062 ~ 19185772 (-)
LOC118944057 NA coding upstream 602542 19397081 ~ 19398144 (-)
LOC118944022 NA coding upstream 703750 19498562 ~ 19502464 (-)
LOC110503947 LOC106613039 coding upstream 711366 19506178 ~ 19517866 (-)
G1909845 NA non-coding downstream 14046 18773602 ~ 18775173 (-)
G1909915 NA non-coding downstream 22457 18766454 ~ 18766762 (-)
G1909914 NA non-coding downstream 22772 18766216 ~ 18766447 (-)
G1909911 NA non-coding downstream 33733 18754988 ~ 18755486 (-)
G1909902 NA non-coding downstream 48937 18740065 ~ 18740282 (-)
G1909924 NA non-coding upstream 16259 18811071 ~ 18811495 (-)
G1909927 NA non-coding upstream 19889 18814701 ~ 18815028 (-)
G1909930 LOC106612933 non-coding upstream 24441 18819253 ~ 18825843 (-)
G1909960 NA non-coding upstream 79911 18874723 ~ 18874925 (-)
G1909971 NA non-coding upstream 85875 18880687 ~ 18880959 (-)
LOC110503924 LOC107554284 other downstream 354427 18432024 ~ 18434798 (-)
LOC118944080 LOC106612823 other downstream 1510809 17277554 ~ 17278524 (-)
G1907951 NA other downstream 2627993 16158846 ~ 16161226 (-)
G1907922 NA other downstream 2656657 16131990 ~ 16132562 (-)
LOC110503846 NA other downstream 2744914 16036987 ~ 16044740 (-)
G1910398 NA other upstream 365637 19160449 ~ 19162158 (-)
G1910539 NA other upstream 538029 19332841 ~ 19333225 (-)
G1910651 NA other upstream 695905 19490717 ~ 19491608 (-)
G1910996 NA other upstream 896254 19691066 ~ 19691513 (-)

Expression


Co-expression Network