Item | Value |
---|---|
gene id | LOC110503947 |
gene name | LOC106613039 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048588.1 |
NCBI id | CM023242.2 |
chromosome length | 45930806 |
location | 19506178 ~ 19517866 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
hypermethylated in cancer 1 protein-like isoform X1 |
id | description |
---|---|
K24384 | HIC; hypermethylated in cancer protein |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021582610.2 | False | 3288 | mRNA | 0.54 | 2 | 19506178 | 19515249 |
XM_021582612.2 | False | 3304 | mRNA | 0.54 | 2 | 19506178 | 19515249 |
XM_021582611.2 | False | 3298 | mRNA | 0.54 | 2 | 19506178 | 19517866 |
XM_036961809.1 | True | 3314 | mRNA | 0.54 | 2 | 19506178 | 19517866 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118944022 | NA | coding | downstream | 5098 | 19498562 ~ 19502464 (-) |
LOC118944057 | NA | coding | downstream | 108034 | 19397081 ~ 19398144 (-) |
LOC110503944 | LOC106612932 | coding | downstream | 320406 | 18968062 ~ 19185772 (-) |
wdr81 | wdr81 | coding | downstream | 692378 | 18795254 ~ 18813800 (-) |
LOC110503941 | LOC106612935 | coding | downstream | 711366 | 18789219 ~ 18794812 (-) |
tsr1 | LOC106613038 | coding | upstream | 8030 | 19525896 ~ 19542981 (-) |
gmfg | gmfg | coding | upstream | 69044 | 19586910 ~ 19589097 (-) |
nkapd1 | cssa09h11orf57 | coding | upstream | 342973 | 19860839 ~ 19864025 (-) |
pih1d2 | pih1d2 | coding | upstream | 376224 | 19894090 ~ 19896893 (-) |
LOC110503955 | LOC106613029 | coding | upstream | 379138 | 19897004 ~ 19904770 (-) |
G1910652 | NA | non-coding | downstream | 14181 | 19491770 ~ 19491997 (-) |
G1910633 | NA | non-coding | downstream | 29680 | 19476241 ~ 19476498 (-) |
G1910630 | NA | non-coding | downstream | 31595 | 19474289 ~ 19474583 (-) |
G1910604 | NA | non-coding | downstream | 91875 | 19414084 ~ 19414303 (-) |
G1910931 | NA | non-coding | upstream | 52995 | 19570861 ~ 19576495 (-) |
G1910942 | NA | non-coding | upstream | 90800 | 19608666 ~ 19610426 (-) |
G1910950 | NA | non-coding | upstream | 99303 | 19617169 ~ 19617575 (-) |
G1910951 | NA | non-coding | upstream | 99797 | 19617663 ~ 19617916 (-) |
G1910952 | NA | non-coding | upstream | 100167 | 19618033 ~ 19618262 (-) |
G1910651 | NA | other | downstream | 14570 | 19490717 ~ 19491608 (-) |
G1910539 | NA | other | downstream | 172953 | 19332841 ~ 19333225 (-) |
G1910398 | NA | other | downstream | 344020 | 19160449 ~ 19162158 (-) |
LOC110503924 | LOC107554284 | other | downstream | 1071386 | 18432024 ~ 18434798 (-) |
G1910996 | NA | other | upstream | 173200 | 19691066 ~ 19691513 (-) |
G1911862 | NA | other | upstream | 942802 | 20460668 ~ 20461437 (-) |
G1912470 | NA | other | upstream | 1454813 | 20972679 ~ 20976236 (-) |
G1913665 | NA | other | upstream | 2345722 | 21863588 ~ 21864274 (-) |
G1913663 | NA | other | upstream | 2353387 | 21871253 ~ 21872149 (-) |