gmfg (gmfg)


Basic Information

Item Value
gene id gmfg
gene name gmfg
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 19586910 ~ 19589097 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961676.1
CTGGTGGATGCTCTAGTATTTGTTAATGCCTGCCCTTCCCTACTGTATGTGCTACAACATAAAAGGAGGATCTTGAGAGTCAGACAGCATCCTGTCACAAGCAGTTGGCCGAGGAGGAACTACCTTTACAATAAGACAGTATCTTTGCAAACAAGAACCCAAAACAAAACCTCTTCTAGAATGTCAAGCTCTTTGGTTGTGTGCGAGGTGGATGAGAGTCTGAAAGAAAAACTGAAGAAGTTTAGATTTCGAAAAGAGACCAACAATGCAGCCATCCTGATGAAAATTGACATGGAGAAACAGCTTGTGATCCTGGAGGAAGAGTATGAGGACATCTCCCTGGATGACCTGAGGAATGAACTTCCAGAGCGGCAGCCAAGATTCATTGTTTACAGCTACAAATACGTCCATACAGATGGCAGGGTGTCCTACCCGCTGTGTTTCATATTCTCAAGTCCAGTGGGGTGCAAGCCTGAGCAGCAAATGATGTACGCAGGCAGCAAGAACCAACTGGTCTCCGCAGCAGAGCTCACAAAGGTTTTTGAGACGCGAAACATAGATGATTTGTCTGAAGAGTGGCTGATAAACAAACTGTCTTTCTTTCGCTGAACAGACACTTGTGTTCACATTAGCAAAAGTGCATGTATTGAACATACCAGTACATTAACTTCATTACTGGTTTGCAATAAATTGCTTATAGTGGCACTTATGTTATTGCATTCTTATTCCCTAGTTGTACTCAGAAACCATTATTACCAGCCTGGTTGCCAGTCTTTCTGCTCCCTTTTGTTGACATggtagcacaaacagatctgggaccaggctacattaCCACCACTTTGGAAGGAACATTTTT

Function

symbol description
gmfg Predicted to enable Arp2/3 complex binding activity; actin binding activity; and growth factor activity. Acts upstream of or within sprouting angiogenesis. Is expressed in blood vessel and head. Orthologous to human GMFG (glia maturation factor gamma).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component
GO:0003779 actin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961676.1 True 856 mRNA 0.43 7 19586910 19589097

Neighbor

gene id symbol gene type direction distance location
tsr1 LOC106613038 coding downstream 43929 19525896 ~ 19542981 (-)
LOC110503947 LOC106613039 coding downstream 69044 19506178 ~ 19517866 (-)
LOC118944022 NA coding downstream 85830 19498562 ~ 19502464 (-)
LOC118944057 NA coding downstream 188766 19397081 ~ 19398144 (-)
LOC110503944 LOC106612932 coding downstream 401138 18968062 ~ 19185772 (-)
nkapd1 cssa09h11orf57 coding upstream 271742 19860839 ~ 19864025 (-)
pih1d2 pih1d2 coding upstream 304993 19894090 ~ 19896893 (-)
LOC110503955 LOC106613029 coding upstream 307907 19897004 ~ 19904770 (-)
LOC118944068 LOC106581084 coding upstream 318062 19907159 ~ 19909801 (-)
LOC101268962 LOC106581153 coding upstream 322022 19911119 ~ 19941312 (-)
G1910931 NA non-coding downstream 10415 19570861 ~ 19576495 (-)
G1910652 NA non-coding downstream 94913 19491770 ~ 19491997 (-)
G1910633 NA non-coding downstream 110412 19476241 ~ 19476498 (-)
G1910630 NA non-coding downstream 112327 19474289 ~ 19474583 (-)
G1910942 NA non-coding upstream 19569 19608666 ~ 19610426 (-)
G1910950 NA non-coding upstream 28072 19617169 ~ 19617575 (-)
G1910951 NA non-coding upstream 28566 19617663 ~ 19617916 (-)
G1910952 NA non-coding upstream 28936 19618033 ~ 19618262 (-)
G1910971 NA non-coding upstream 58943 19648040 ~ 19648254 (-)
G1910651 NA other downstream 95302 19490717 ~ 19491608 (-)
G1910539 NA other downstream 253685 19332841 ~ 19333225 (-)
G1910398 NA other downstream 424752 19160449 ~ 19162158 (-)
LOC110503924 LOC107554284 other downstream 1152118 18432024 ~ 18434798 (-)
G1910996 NA other upstream 101969 19691066 ~ 19691513 (-)
G1911862 NA other upstream 871571 20460668 ~ 20461437 (-)
G1912470 NA other upstream 1383582 20972679 ~ 20976236 (-)
G1913665 NA other upstream 2274491 21863588 ~ 21864274 (-)
G1913663 NA other upstream 2282156 21871253 ~ 21872149 (-)

Expression


Co-expression Network