Item | Value |
---|---|
gene id | LOC110503363 |
gene name | LOC106613031 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048588.1 |
NCBI id | CM023242.2 |
chromosome length | 45930806 |
location | 19709339 ~ 19860123 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
TC1-like transposase |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036961214.1 | False | 4683 | mRNA | 0.49 | 5 | 19709339 | 19860123 |
XM_036961215.1 | False | 5513 | mRNA | 0.48 | 6 | 19709339 | 19860123 |
XM_036961216.1 | False | 4757 | mRNA | 0.49 | 6 | 19709339 | 19860123 |
XM_036961217.1 | False | 3894 | mRNA | 0.51 | 5 | 19709339 | 19860123 |
TU2185209 | True | 4026 | lncRNA | 0.42 | 2 | 19709478 | 19729685 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC100499594 | socs5 | coding | upstream | 94071 | 19610822 ~ 19615268 (+) |
LOC110503951 | LOC106613034 | coding | upstream | 98904 | 19589962 ~ 19610435 (+) |
LOC110503952 | LOC106581163 | coding | upstream | 122515 | 19581625 ~ 19586824 (+) |
taok1a | LOC106613037 | coding | upstream | 132820 | 19545247 ~ 19576519 (+) |
dph1 | dph1 | coding | upstream | 413852 | 19190189 ~ 19295487 (+) |
LOC110503956 | LOC106613030 | coding | downstream | 6135 | 19866258 ~ 19894128 (+) |
LOC110503961 | LOC106613023 | coding | downstream | 242341 | 20102464 ~ 20259284 (+) |
LOC110503965 | LOC106613020 | coding | downstream | 571687 | 20431810 ~ 20447877 (+) |
LOC110503967 | LOC106613018 | coding | downstream | 591456 | 20451579 ~ 20455188 (+) |
LOC110503364 | LOC106613014 | coding | downstream | 613141 | 20473264 ~ 20484611 (+) |
G1910775 | NA | non-coding | upstream | 7103 | 19701575 ~ 19702236 (+) |
G1910768 | NA | non-coding | upstream | 17819 | 19691061 ~ 19691520 (+) |
G1910761 | NA | non-coding | upstream | 22494 | 19686614 ~ 19686845 (+) |
G1910748 | NA | non-coding | upstream | 34754 | 19674230 ~ 19674585 (+) |
G1910740 | NA | non-coding | upstream | 47291 | 19661828 ~ 19662048 (+) |
G1910880 | LOC106613028 | non-coding | downstream | 50985 | 19911108 ~ 19913625 (+) |
G1910840 | NA | non-coding | downstream | 59144 | 19919267 ~ 19921593 (+) |
G1911151 | NA | non-coding | downstream | 113463 | 19973586 ~ 19974431 (+) |
G1911293 | NA | non-coding | downstream | 219150 | 20079273 ~ 20079544 (+) |
G1911310 | NA | non-coding | downstream | 228181 | 20088304 ~ 20088552 (+) |
G1910697 | NA | other | upstream | 89609 | 19619418 ~ 19619730 (+) |
G1909739 | wdr81 | other | upstream | 912061 | 18789221 ~ 18797278 (+) |
G1909273 | kiaa0100 | other | upstream | 1235512 | 18473203 ~ 18473827 (+) |
G1909262 | NA | other | upstream | 1255632 | 18450694 ~ 18453707 (+) |
LOC110503911 | nek8 | other | upstream | 1598760 | 18090022 ~ 18110579 (+) |
G1911460 | LOC105030512 | other | downstream | 424197 | 20284320 ~ 20286066 (+) |
G1911474 | NA | other | downstream | 444640 | 20304763 ~ 20307392 (+) |
G1912565 | LOC106612993 | other | downstream | 1341013 | 21201136 ~ 21202449 (+) |
sacs | LOC106612984 | other | downstream | 1800039 | 21648371 ~ 21683308 (+) |
G1913153 | NA | other | downstream | 2333667 | 22193790 ~ 22194607 (+) |
G1910819 | NA | non-coding | downstream | 87395 | 19817080 ~ 19819318 (+) |