LOC110504025 (LOC106612974)


Basic Information

Item Value
gene id LOC110504025
gene name LOC106612974
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 21885499 ~ 21896235 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021582804.2
TTAAAAGAGGTGGAGGTAGTTTGGACATTGTTGCCTTTTTATGTGATATAGGCTAATTCACCTCGTAGGAACATTGTTGTAGTGCACAGAATGGCTACTCGACCAGGGTGGTCGGTCGCCACCGCGATTAACCCCCAGTTTACCCCTAGGCTCTATAGAGGGATAGGCTACGTAGCCTATATAAAATACGATTTATTTTCCCCCGTTAGTGGACAATGCATTGGTGGTGTGCGCCTTTTGTCCAGCGACGAAACTTATCTGCAAGAAAAGTTACTTAACTTGATTAATAGTATCCCCATCTGAAAGGATCTAATCGTTTCCATCCTTCGGCTGCAAATATATGCCTTGGGGAAACGGAATGGGGGGTGGAGCACCCGTCTTTTGGAGTCCACTGTTTAATGACCCATTGTTCCCTGCATGTTCCCTGCATGGTCCTACATTTATGTTGTATTTTACTTAGCAAGTGTTTATACATATTCATTCGTTGACTTTTATTTTTCAAATGAGTTCATAACGGGAGCTGATAGGACATGTGAATAGTTATATttgtattaaatacattttcatctGATAGTATAGTATCATATATGACGTGATTTAGATATAAGTTATGAGGCACGTTTCTTTAGACTGTGGAGATTTTCGTTGTCCTTGTGGGAACTAACGTTAGTTTATAGGCAGGGATGTACTATGCTGCCAGAGGTGGGCGTGATGCGTGTCCCACCACTCAAATCACCTCCCGTACGGAGAATCCGACCATCCAACCGATGTCATcccaaataataataaaaagagcGTTAGCTATCCGTGATGGCAACTATTACGCATGCTTAACATTAGCCTATTATAGAGAAAATGGgcttttgtaaaaaataaaatatatattcaaacaatacatgtttttcttttgaatgAATGGGATGTAACAGTTATCTCCTTACGCCCAATTTTCAGCCCTCtatctttaaaaaaagaaagataTACAGGCTAGTAGCCTTTAGACTATACTACACCATCGACTCGCACACGGCCCACTGTTCTCAATAGAACGCTCCTATAAAAGAGGGTGAAAGAAATTAAAGCAGccgcctccctctcctcccagcttCCCCCCGCGTTCCTCTCCTCCGCCGCGGCCCAAACAATAGGCGCATATGGAGAGGAATACTAATGCACACGAGGGACTCGGTGTGCCGACAGGCGAATCATGCACCTCGGCCGCCGCTTTGAATGCACAACTGGAACACATCACCCAATAAGATGTCAACGCAGAGCAAACTGGCTCCGCTTCGACGGTGATGAGTGCGCTCCAGAGCTCCCCCTGGGGGCTGATGCTGGCACTGGAACAGCAGGTGGGCGAGCTGAGAGTGGACACAGATGATGTCACCTATGAGGGGACCCAAGGGGACAGTCGGCCCAGCTCAGGGCTCTATGAGTCGAGTGAGAGCCAGTCTCCAAGGGGGCATTCCTGTCACTCTGACTTCCTAGAGCCCCACCCTGGCTGGGGCTTCAGCAGCACAGAGAGGCCGAAGTCTCTGGGCTATGCCCTCCAGCTGACAGGTGAGAGTCTGATGGAGCCAGCCCCTCATGCTActgttcccctctccttctccgccCCCTATCCACACCTTGAGGGAATCGCTGAGGAGGGTACGGCCGAGGAGCCCTGGCAGTGGGACCTACACTGTGCCCAGGGTTGGGAGGATGAGGACCAGGCCACCCAGGAGGATTTCCAGCAGGCCATGAGGGTTAAAGGCTACATCCTGGGTCTCATCCATCGCTACGCGCTCTCACCCCGGCCCTGCATGCCTCGTACCAGCCTGGGGCCTGACCCCTCCACCCCCTACTCCTCCAGCATAAACAGGCAGAGCAGCCTGCGAAGGAAACCTACTCTTCACACCTCCGAGCACTGCATCTCTGACCCACAGGACCTCTACCCTGACCTTGAGTGCCAGGCCTGGTGGTGTGACTCGCTAGAAAGGGAGGAATGGGGGGGAGAGGCCCCATCCATGGAGAAGGATTGTTATCGGTCTTTACCCTACCCCCACTTCAGACCCCACTCCCTGGCCGGGGGCCATCCACCCTTTCTGGACCCCGTTTGTGGAGCTCTGGACCCTTGTTTTAGTAGTGCGCCTGATTCCCCCAAGCACTACCCGCTGCCCCACTCCCCGGCTTCATATAACCACTTGGTCAgtgcccagtacatccctgggcaGGCCTGCCACACCCCTGTACGCTCCCCCTCACACTTTCCTCCAGAACGCTCCCCCTCACACTATCTTCTAGAGCCCTCCAAACCCAGCCAAACCTTTGTGTCCCCAGACCAGAGCAGCTCAAAGCCCAGGGCCATGGGGAAGAAAAGCCATGAGGAGAGACAGAGCTCCAAAAAGCCTGGCCACAAGACATGCCGCTCCCAGTCTGAGAACAGTCTGATGGGGAAGAGGGCTCTCCCTAAGCGCAGGTACAGCACAGCCGAGCACCCCCAGCACCAGAGGGGCCAGGTCCCATATGCAGGCCCCCAGCATAAGAACAATGCTGGGGGGCGACGCTGGTGCTCCACCCTGGAGCTCAGTCAGGAGGAAGGGGAGACCCAGGGTGAGCAGACCCACAGACGCCCACCTCGTAGGGCCCGCCACACCCAGGCCTGCTCTCATCCCAACCCCAACCACCACTCCCAGGTCCATGCCCAGCCTTGCCTCTCAGAATACCCAGAGAGAGCACCTCTGTGTTGGGGAGAGGAGGGCTATGTGCGGGCCGCCCCTGGGGAGTCAGAGTCCAGCATGAGTGAGGTGTACTCCCCtgcctccagctctctctccagtgattctGATGAGGGGGGGCTGGTATGGCCCCAGCAGCTGCCCCCTCGCCTGGCCCCCTCCGCTTCTTCCTCCCCTAAGGCCTCCCCAGAGGCCTCCTCACAGCCCAAAACCTTTGTCAAAATCAAAGCCTCTCACGCCCTGAAGAAGAAGATTCTGCGATTCCGCGCCGGCTCTCTCAAAGTCATGACCACAGTCTGAGACATATGTCACTGCTTCTACTGCCCATATCCTGCACATTTTAATCCTACATAACCTACAGTTTACACCCTCTGTCTACCTCTGCTGGTTCATGCAGCACTGTCATAAAAAAACAAATCAGCTACTTTACCTTTGGGAAAAACTATGATGTCTGTAACTGGCCTAAGATCAGCATGACGATATCATCTAGCTAAACCACATTTCATCATCATCAGAATGTGCATTAACCATCAACTTGTCTAATGAAGTCCTCCTCTGATGGTTACACTGCCATGTCACATATTGACACCTGAACGTGAACTGCTACCTCTCTTCTCTTAGCTGCACCACCTTGCAGCCTTGACCTGAAGCCAATGTCTGTAGCACTGGCCATGTAGGGGGTGACTGCAGTGaggggtcaacacacacacacatacacacacacacacacacacacttctgtaaaTACCTACCTGTGGCCTTGTTTGTATGAATGTAGTTTGTAAATTAAAGTTTTGTGGTCTCTTAA
>XM_021582803.2
GGCGGAGCACACCATTCTACGTCTGACAGCTACGAAATAGAAAATGTATAGCGCACAGCCACAGGCACTCATGCTGCAAATAGGCAACCAGCGTTATAGCCTAACctaaatgaaaagaaatcagcttGGATATCCACATGTGCGATGAAGAACAAAAGTGGTTGCAACAAGGGGGGGTCAAAAACAACAAGATAAGGACTTGAGCAAGAAtattttgtaaaaataaatattgcAAGTAATTCAGGTGTTTCTATCAAACCATTGGAAAAGGTTTTGGAACCATGTACGGTGCCTTTTCTTTCCCAATGACTACGGAGCGCAGTCGGAATAAGGAGCGTATGGAGGCCAGTCTGACCGGACTTTGTGAGCTGGAGATCCGCAAGCAGAGGCAGGAGTGCCTGGTCCTCGGTGCTCTGGCCCTGGGGGAGCCCATGCCCGAAAATTACACAAGGAACGAGCTATCGGGTTTCAGAAGTTGGGGGCAAGAGAACTTGACATTGAGACGTCATCTGAGTGCGCTCCAGAGCTCCCCCTGGGGGCTGATGCTGGCACTGGAACAGCAGGTGGGCGAGCTGAGAGTGGACACAGATGATGTCACCTATGAGGGGACCCAAGGGGACAGTCGGCCCAGCTCAGGGCTCTATGAGTCGAGTGAGAGCCAGTCTCCAAGGGGGCATTCCTGTCACTCTGACTTCCTAGAGCCCCACCCTGGCTGGGGCTTCAGCAGCACAGAGAGGCCGAAGTCTCTGGGCTATGCCCTCCAGCTGACAGGTGAGAGTCTGATGGAGCCAGCCCCTCATGCTActgttcccctctccttctccgccCCCTATCCACACCTTGAGGGAATCGCTGAGGAGGGTACGGCCGAGGAGCCCTGGCAGTGGGACCTACACTGTGCCCAGGGTTGGGAGGATGAGGACCAGGCCACCCAGGAGGATTTCCAGCAGGCCATGAGGGTTAAAGGCTACATCCTGGGTCTCATCCATCGCTACGCGCTCTCACCCCGGCCCTGCATGCCTCGTACCAGCCTGGGGCCTGACCCCTCCACCCCCTACTCCTCCAGCATAAACAGGCAGAGCAGCCTGCGAAGGAAACCTACTCTTCACACCTCCGAGCACTGCATCTCTGACCCACAGGACCTCTACCCTGACCTTGAGTGCCAGGCCTGGTGGTGTGACTCGCTAGAAAGGGAGGAATGGGGGGGAGAGGCCCCATCCATGGAGAAGGATTGTTATCGGTCTTTACCCTACCCCCACTTCAGACCCCACTCCCTGGCCGGGGGCCATCCACCCTTTCTGGACCCCGTTTGTGGAGCTCTGGACCCTTGTTTTAGTAGTGCGCCTGATTCCCCCAAGCACTACCCGCTGCCCCACTCCCCGGCTTCATATAACCACTTGGTCAgtgcccagtacatccctgggcaGGCCTGCCACACCCCTGTACGCTCCCCCTCACACTTTCCTCCAGAACGCTCCCCCTCACACTATCTTCTAGAGCCCTCCAAACCCAGCCAAACCTTTGTGTCCCCAGACCAGAGCAGCTCAAAGCCCAGGGCCATGGGGAAGAAAAGCCATGAGGAGAGACAGAGCTCCAAAAAGCCTGGCCACAAGACATGCCGCTCCCAGTCTGAGAACAGTCTGATGGGGAAGAGGGCTCTCCCTAAGCGCAGGTACAGCACAGCCGAGCACCCCCAGCACCAGAGGGGCCAGGTCCCATATGCAGGCCCCCAGCATAAGAACAATGCTGGGGGGCGACGCTGGTGCTCCACCCTGGAGCTCAGTCAGGAGGAAGGGGAGACCCAGGGTGAGCAGACCCACAGACGCCCACCTCGTAGGGCCCGCCACACCCAGGCCTGCTCTCATCCCAACCCCAACCACCACTCCCAGGTCCATGCCCAGCCTTGCCTCTCAGAATACCCAGAGAGAGCACCTCTGTGTTGGGGAGAGGAGGGCTATGTGCGGGCCGCCCCTGGGGAGTCAGAGTCCAGCATGAGTGAGGTGTACTCCCCtgcctccagctctctctccagtgattctGATGAGGGGGGGCTGGTATGGCCCCAGCAGCTGCCCCCTCGCCTGGCCCCCTCCGCTTCTTCCTCCCCTAAGGCCTCCCCAGAGGCCTCCTCACAGCCCAAAACCTTTGTCAAAATCAAAGCCTCTCACGCCCTGAAGAAGAAGATTCTGCGATTCCGCGCCGGCTCTCTCAAAGTCATGACCACAGTCTGAGACATATGTCACTGCTTCTACTGCCCATATCCTGCACATTTTAATCCTACATAACCTACAGTTTACACCCTCTGTCTACCTCTGCTGGTTCATGCAGCACTGTCATAAAAAAACAAATCAGCTACTTTACCTTTGGGAAAAACTATGATGTCTGTAACTGGCCTAAGATCAGCATGACGATATCATCTAGCTAAACCACATTTCATCATCATCAGAATGTGCATTAACCATCAACTTGTCTAATGAAGTCCTCCTCTGATGGTTACACTGCCATGTCACATATTGACACCTGAACGTGAACTGCTACCTCTCTTCTCTTAGCTGCACCACCTTGCAGCCTTGACCTGAAGCCAATGTCTGTAGCACTGGCCATGTAGGGGGTGACTGCAGTGaggggtcaacacacacacacatacacacacacacacacacacacttctgtaaaTACCTACCTGTGGCCTTGTTTGTATGAATGTAGTTTGTAAATTAAAGTTTTGTGGTCTCTTAA

Function

NR:

description
dapper homolog 3-like isoform X1

GO: NA

KEGG:

id description
K22154 DACT; dapper

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021582804.2 False 3528 mRNA 0.52 4 21885499 21895715
XM_021582803.2 True 2739 mRNA 0.55 4 21885499 21896235

Neighbor

gene id symbol gene type direction distance location
LOC110504022 NA coding downstream 35962 21845225 ~ 21849537 (-)
polr2i rpb9 coding downstream 55176 21826850 ~ 21830323 (-)
pglyrp5 polr2i coding downstream 59190 21824919 ~ 21826309 (-)
foxg1c LOC106613045 coding downstream 62778 21819254 ~ 21822721 (-)
snrpd2 snrpd2 coding downstream 85034 21796966 ~ 21800465 (-)
LOC110504027 LOC106612972 coding upstream 3386 21899621 ~ 21987496 (-)
LOC110504029 LOC106612970 coding upstream 185200 22081435 ~ 22173799 (-)
mxh LOC106612969 coding upstream 350343 22246578 ~ 22265501 (-)
LOC110503369 LOC106612967 coding upstream 566031 22462266 ~ 22676276 (-)
LOC110504033 LOC106612966 coding upstream 1102822 22999057 ~ 23048741 (-)
G1913661 NA non-coding downstream 6267 21878222 ~ 21879232 (-)
G1913624 NA non-coding downstream 91250 21793627 ~ 21794249 (-)
G1913567 NA non-coding downstream 179112 21705625 ~ 21706387 (-)
G1913566 NA non-coding downstream 180225 21705041 ~ 21705274 (-)
G1913564 LOC106612984 non-coding downstream 202195 21669061 ~ 21683304 (-)
G1913793 NA non-coding upstream 175605 22071840 ~ 22072322 (-)
G1913752 NA non-coding upstream 183060 22079295 ~ 22080052 (-)
G1913828 NA non-coding upstream 253044 22149279 ~ 22149684 (-)
G1913968 NA non-coding upstream 471560 22367795 ~ 22368000 (-)
G1913663 NA other downstream 13350 21871253 ~ 21872149 (-)
G1913665 NA other downstream 21225 21863588 ~ 21864274 (-)
G1912470 NA other downstream 909263 20972679 ~ 20976236 (-)
G1911862 NA other downstream 1424062 20460668 ~ 20461437 (-)
G1910996 NA other downstream 2193986 19691066 ~ 19691513 (-)
G1915836 NA other upstream 1855608 23751843 ~ 23752463 (-)
LOC110504083 NA other upstream 4267230 26163462 ~ 26165289 (-)
LOC110503381 LOC106613064 other upstream 4314181 26208892 ~ 26241410 (-)
LOC110504098 LOC106613118 other upstream 5014549 26910083 ~ 26935725 (-)
G1919707 NA other upstream 5433215 27329450 ~ 27331899 (-)

Expression


Co-expression Network