mxh (LOC106612969)


Basic Information

Item Value
gene id mxh
gene name LOC106612969
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 22246578 ~ 22265501 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961086.1
ATGGAGGAGCCCATCCGTAGGCTGCTCCTAGTTATGCCTAAGTCTTGCCCGGGGGAGAGACTAATTGAATTCATTGAGAAGATTCATGAACTGTGCAGAATTGGGAACTCAAGTGAGAAGAATCTGCATACTTGCCTACGTCCTGTATTCCAACAGTGGGATAGTTATCTCAGTAACACCAAAAGATCATTCCTCAACAAAGTGGCAGCCATGATAAAAAACTATGATAAAGAACATCGTGGGAGAGAGGTGATGACTTTCAGTGACTATTGTGTATATGAACATGCAGTTCAAAAGCACATCCTTGGACTTCAAGAGCCGGCCTTGGATGTCCTGAAAGCCATTGGAGGTATGGTACAAGCAGAGTTTAGAAATGTGTGTGAAGCTTGTTTCAAAAGCTATCCTCAGCTCAGATCCATGGCTTTGAGTAAGATTGACGAAATCCAGACTAAACAGGAAACCAAAGTTGAGAAGAGAATCAAAGAATACATCAATATGGAGCGATTGGTGTACACTCAGGACAGTATTTTCATCAAGGGCTTGAAGGATCATAAAGCTCAGTTCAAAGAAGCCATTGAGGAAGAGCGTTTTTATGACCCAGAGGAAATTGAGGACATCACTGCTACATTCAACAGTACCACATTTGATAGCAGGAAGCTGACCCCAGATAAACTTGGGGTCTACTATGAGATTGTCTACCAGCGCCTGGCAGACTACGTGCCCATGCTGATCCTGCAATTCATGCTTAAGGAGTCAGCCAAGATGCTTTGTATCCAGATTATGGATGAGAGAGACGGAGCTGATGTTGTCAAACTGCTGAGCGAAGACTCTATGGAAGGCCGCAGGAGAGCAGGCCTGCATCAACGCCTGGACCGCCTGAAAAAGGCCCAGGAAAAACTTAGTGAGTTTTAGGACTCTCAATACTGTAGTCCCATTTTATGTGATGTCTAAATGGACTGCCTTCCCTCTGACTCTTGTCATACAACTTGATAATCATTCTTTGACATTGAGGTAATTGATATTTCAAAATTTAAGTGTGTGTCAATATATTACCAAAATCATACATACTGTGCTC

Function

NR:

description
interferon-induced GTP-binding protein Mx3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961086.1 True 1075 mRNA 0.43 6 22246578 22265501

Neighbor

gene id symbol gene type direction distance location
LOC110504029 LOC106612970 coding downstream 72779 22081435 ~ 22173799 (-)
LOC110504027 LOC106612972 coding downstream 259082 21899621 ~ 21987496 (-)
LOC110504025 LOC106612974 coding downstream 350343 21885499 ~ 21896235 (-)
LOC110504022 NA coding downstream 397041 21845225 ~ 21849537 (-)
polr2i rpb9 coding downstream 416255 21826850 ~ 21830323 (-)
LOC110503369 LOC106612967 coding upstream 196765 22462266 ~ 22676276 (-)
LOC110504033 LOC106612966 coding upstream 733556 22999057 ~ 23048741 (-)
LOC110504036 LOC106581096 coding upstream 874466 23139967 ~ 23144967 (-)
LOC110504038 LOC106612963 coding upstream 961296 23226797 ~ 23295189 (-)
LOC110503370 LOC106581078 coding upstream 1016382 23281883 ~ 23300679 (-)
G1913828 NA non-coding downstream 96894 22149279 ~ 22149684 (-)
G1913752 NA non-coding downstream 166526 22079295 ~ 22080052 (-)
G1913793 NA non-coding downstream 174256 22071840 ~ 22072322 (-)
G1913661 NA non-coding downstream 367346 21878222 ~ 21879232 (-)
G1913968 NA non-coding upstream 102294 22367795 ~ 22368000 (-)
G1913969 NA non-coding upstream 102614 22368115 ~ 22368358 (-)
G1913971 NA non-coding upstream 103089 22368590 ~ 22369043 (-)
G1914226 NA non-coding upstream 141789 22407290 ~ 22407625 (-)
G1914243 NA non-coding upstream 192499 22458000 ~ 22458931 (-)
G1913663 NA other downstream 374429 21871253 ~ 21872149 (-)
G1913665 NA other downstream 382304 21863588 ~ 21864274 (-)
G1912470 NA other downstream 1270342 20972679 ~ 20976236 (-)
G1911862 NA other downstream 1785141 20460668 ~ 20461437 (-)
G1910996 NA other downstream 2555065 19691066 ~ 19691513 (-)
G1915836 NA other upstream 1486342 23751843 ~ 23752463 (-)
LOC110504083 NA other upstream 3897964 26163462 ~ 26165289 (-)
LOC110503381 LOC106613064 other upstream 3944915 26208892 ~ 26241410 (-)
LOC110504098 LOC106613118 other upstream 4645283 26910083 ~ 26935725 (-)
G1919707 NA other upstream 5063949 27329450 ~ 27331899 (-)

Expression


Co-expression Network