LOC110504036 (LOC106581096)


Basic Information

Item Value
gene id LOC110504036
gene name LOC106581096
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 23139967 ~ 23144967 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021582835.2
gtgtgtgtaaacatcaCCTGAAGTGATTCCAATCCCAACAGTACAAGGCTTTATAAAAGCACACACAGCTGTAGCACTGAGACACTACAGTTCAGAGGGCACACCATCAGAgactggctgagagagagagacagagacagaggtgatCCAGGGTGCAACACAGTTTCCACACTCACAGGAAAACTCAGTTTGAGTGAGGAGCTCATCTTCTGTAGTTGGACCATTATCATCCAACGACAGGAGCTAGAAAATGGTGTTTGGTATCCAGAAGCTCATCCAGGACCACCTGGTGGAGCGAAGAATCCGCAGAACTCGGCTGGTGACCAAAGATGGCCGCTGCAACATTGAATTTGGCAACGTCAAATACGGCAACCACTTTGCTTTCCTTGTGGACTTCTGGACGACCTTTGTGGAGTTCCGCTGGCGCTTTGTCCTTTTCTTCTTCATCACCTCCTTCACCCTGAGCTGGTTCATCTTCAGCCTGCTGTGGTTCTGGATTGCCCGGAACAACGGGGATCTGAAGTGGCAGAACCCCTCAAACGATCACACCCCATGTGTGTGGAACGTCGTCGGTCTCACTACAGCCTTCCTTTTCTCCCTGGAGACCCAGACCACCATCGGGTATGGTGTACGCGCCATTACCCCTCACTGTCCTGTTGCTGTAGCCCTTATCATTATCCAGACTCTCATAGGGGCCCTCATACACTGCTTCATATGTGGAGTCATCGTGTCCAAGATATCCCTCCCTAAGAAAAGGGCCAAGACCATCACATTCAGTGAGATGGCTGTCATCTGTCCTAAGAAGGACTTCCTTTGCCTCATGATAAGAGTGGCCAACTTACGCAAGACCCTGATGATCGGGAGCCAAATCTACGGCAAGCTGTTGAGGACAACCGTCAAGCCCGATGGGGAGACAATCATCATGGACCAGGTGAACATTGAGTTCCTGATGGACGCTGGGAAGGACAACCTCTTCTTTGTGTGCCCTCTCACACTCTACCATGTGATTGACAAGGCTAGCCCTTTCTTTGACATGGCAGAGGACACCTTCCGTAAACAGGAGTTTGAGCTGGTGGTATTTCTGGACGGCACAGCCGAGACCACCAGCTCAGCCTGCCAGGTCAGGACTTCCTTCATCCCTCAGGAGATCATGTGGGGTTACAACTTCCTGCCCATCATCTCCCGCAGTAAAGAGGGCAAGTACAGAGTGGACTTCTCCAACTTCTCCAAGGTGGTGGCGGTGACCACTGCACACTGTGCCTACTGCTTCCACAACATAGTAGGACACCACATCTCCTCCATTAATGGAATCGACAACGGTGGATTTGGAGTGATTGGTATCCTAGAATAACTTAATATGACCAAGTTGTGAACTTTTGGAGGAAAAATGtataatatgtacagttgaagtgggaagtttacatacacttaggttggagtcatttaaaatagtttttcaaccag

Function

NR:

description
ATP-sensitive inward rectifier potassium channel 1-like

GO: NA

KEGG:

id description
K04995 KCNJ1, KIR1.1; potassium inwardly-rectifying channel subfamily J member 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021582835.2 True 1464 mRNA 0.49 2 23139967 23144967

Neighbor

gene id symbol gene type direction distance location
LOC110504033 LOC106612966 coding downstream 91226 22999057 ~ 23048741 (-)
LOC110503369 LOC106612967 coding downstream 463691 22462266 ~ 22676276 (-)
mxh LOC106612969 coding downstream 874466 22246578 ~ 22265501 (-)
LOC110504029 LOC106612970 coding downstream 966168 22081435 ~ 22173799 (-)
LOC110504027 LOC106612972 coding downstream 1152471 21899621 ~ 21987496 (-)
LOC110504038 LOC106612963 coding upstream 81830 23226797 ~ 23295189 (-)
LOC110503370 LOC106581078 coding upstream 136916 23281883 ~ 23300679 (-)
LOC110504040 LOC106612962 coding upstream 185152 23330119 ~ 23341771 (-)
LOC110504042 LOC106612961 coding upstream 207145 23352112 ~ 23358660 (-)
glb1l2 LOC106612957 coding upstream 215186 23360153 ~ 23388694 (-)
G1915200 NA non-coding downstream 9270 23125809 ~ 23130697 (-)
G1915199 NA non-coding downstream 10661 23125096 ~ 23129306 (-)
G1915179 LOC106612965 non-coding downstream 42381 23091134 ~ 23097586 (-)
G1915166 NA non-coding downstream 65778 23073946 ~ 23074189 (-)
G1915162 NA non-coding downstream 73243 23066357 ~ 23066724 (-)
G1915207 NA non-coding upstream 57158 23202125 ~ 23202459 (-)
G1915254 NA non-coding upstream 74619 23219586 ~ 23219798 (-)
G1915279 NA non-coding upstream 150703 23295670 ~ 23295905 (-)
G1915288 NA non-coding upstream 163870 23308837 ~ 23309911 (-)
G1915296 NA non-coding upstream 166550 23311517 ~ 23312147 (-)
G1913663 NA other downstream 1267818 21871253 ~ 21872149 (-)
G1913665 NA other downstream 1275693 21863588 ~ 21864274 (-)
G1912470 NA other downstream 2163731 20972679 ~ 20976236 (-)
G1911862 NA other downstream 2678530 20460668 ~ 20461437 (-)
G1910996 NA other downstream 3448454 19691066 ~ 19691513 (-)
G1915836 NA other upstream 606876 23751843 ~ 23752463 (-)
LOC110504083 NA other upstream 3018498 26163462 ~ 26165289 (-)
LOC110503381 LOC106613064 other upstream 3065449 26208892 ~ 26241410 (-)
LOC110504098 LOC106613118 other upstream 3765817 26910083 ~ 26935725 (-)
G1919707 NA other upstream 4184483 27329450 ~ 27331899 (-)

Expression


Co-expression Network