LOC110503370 (LOC106581078)


Basic Information

Item Value
gene id LOC110503370
gene name LOC106581078
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 23281883 ~ 23300679 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110503370
ATGTACCGCTCCAGGATTTGTTGGAGCCAGACCTACGACGTGTGTCTGTGCCATAGTCCTATGGACATCGAAGAAGCCATCCGTCTGGATTCTTACCTGGAGAACCCGCCATGTGGCCTGCGCTGTTTCCTGTCGGCAGCGTGATGCCATCGTGGGGGGTGCCATCCCCACTGAACTATGCCAGGCTGTGCAGAGCAGCCATTGCTGGGCCCTTCTCATCACCCCCAACTTCCTGCTGGATGACTGGTGCCAGTACACGATGCACCAGGCACTGTCTGAGGGGCCCATGTCCAACCGGATCATTCCCCTGGTCCTCACCCTGCCTTACTCTCAGTACCCAAAGGAGCTACGCTTTTACTACTACAAGGACCTGAGCAAGAACCCAGAGTGAGGCTACACACAGGTGTACAAGATAGAGCTGAAGTACTTGGAGGACATGGTTGAAAAAGATCCTGATAAAGTTGATTACAACATGGATAGCTGCTCCCCACATGCCACACAGACAGTCATTGTGCTGCCTCTGAGGACCTGTGCCTCCTGCTCAGAGCAGGCATGTGGAGCTGGTTAG

Function

NR:

description
toll/interleukin-1 receptor domain-containing adapter protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110503370 True 568 mRNA 0.55 4 23281883 23300679

Neighbor

gene id symbol gene type direction distance location
LOC110504036 LOC106581096 coding downstream 136916 23139967 ~ 23144967 (-)
LOC110504033 LOC106612966 coding downstream 233142 22999057 ~ 23048741 (-)
LOC110503369 LOC106612967 coding downstream 605607 22462266 ~ 22676276 (-)
mxh LOC106612969 coding downstream 1016382 22246578 ~ 22265501 (-)
LOC110504029 LOC106612970 coding downstream 1108084 22081435 ~ 22173799 (-)
LOC110504040 LOC106612962 coding upstream 29440 23330119 ~ 23341771 (-)
LOC110504042 LOC106612961 coding upstream 51433 23352112 ~ 23358660 (-)
glb1l2 LOC106612957 coding upstream 59474 23360153 ~ 23388694 (-)
LOC110504044 LOC106581230 coding upstream 111500 23412179 ~ 23539189 (-)
LOC118944114 LOC106609580 coding upstream 123174 23423853 ~ 23426869 (-)
G1915254 NA non-coding downstream 62085 23219586 ~ 23219798 (-)
G1915207 NA non-coding downstream 79424 23202125 ~ 23202459 (-)
G1915200 NA non-coding downstream 151186 23125809 ~ 23130697 (-)
G1915199 NA non-coding downstream 152577 23125096 ~ 23129306 (-)
G1915179 LOC106612965 non-coding downstream 184297 23091134 ~ 23097586 (-)
G1915288 NA non-coding upstream 8158 23308837 ~ 23309911 (-)
G1915296 NA non-coding upstream 10838 23311517 ~ 23312147 (-)
G1915300 NA non-coding upstream 43335 23344014 ~ 23344741 (-)
G1915302 NA non-coding upstream 45255 23345934 ~ 23346391 (-)
G1915303 NA non-coding upstream 46066 23346745 ~ 23347071 (-)
G1913663 NA other downstream 1409734 21871253 ~ 21872149 (-)
G1913665 NA other downstream 1417609 21863588 ~ 21864274 (-)
G1912470 NA other downstream 2305647 20972679 ~ 20976236 (-)
G1911862 NA other downstream 2820446 20460668 ~ 20461437 (-)
G1910996 NA other downstream 3590370 19691066 ~ 19691513 (-)
G1915836 NA other upstream 451164 23751843 ~ 23752463 (-)
LOC110504083 NA other upstream 2862786 26163462 ~ 26165289 (-)
LOC110503381 LOC106613064 other upstream 2909737 26208892 ~ 26241410 (-)
LOC110504098 LOC106613118 other upstream 3610105 26910083 ~ 26935725 (-)
G1919707 NA other upstream 4028771 27329450 ~ 27331899 (-)

Expression


Co-expression Network