LOC110503375 (LOC106612943)


Basic Information

Item Value
gene id LOC110503375
gene name LOC106612943
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 23752934 ~ 23766218 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961089.1
ATGTTTTTCACTGTGTGGGAGGTAGAGAAAAAGGAGAAGAATAAGAAGGAGGAGTCTGATGAAGACAAAGGGTTCCAAGCCACTTACCAGTTGGGTGTGGCCCAGAGTATGTTGGACCTGGCCCCGTTGGTGCTACAAGCAGCCCCTAAGGTAATGGGGGCCTCGGCCGGGTCCCtgctcaaaaatgcccgcaggaaatctatGGGGCCACTGCACCTGGCGAGGAACGTGTTTGTGTGGATAGAAGGTCTGTTGCGCCGCTCACTACCAGACGACGCCCACATCCGGGCCAGTGGACGCCTCGCCGTCGTCATGACACGCATTCCAGATGGACAGAATACTGTGGTGTCAGAGTTCACATCCCGAGAGGACGTTGTGCAGGCGCTGTTGTGCAGCTGCTTTATCCCTGGGTACCATGGTATACAGCCACCGTCTTACAAAGGAGTGCATTATGTGGACGGTGGTATGTCCAGTATCCAGCCAACCCACTCCTCTCCCTATGCACACACCCTCACTGTGTCGCCATTCGCTGGAGAGGCGGACATCTGTCCACCAGACCCTGGCTCCATGTACGTCATCGTCATGAGCGGCATGCCCCTCAACTGCAGTGTGGCCAACGGTTACCGGATCCTTGAAGCCCTCTACCCCTACAACTGGGAGGTTGGACCCCAAAACAACTCTTACTCTATCCACCCAGCCCTTTACCCCTCCACCGAGCCCTCTACTCATTCACCCAGCTCTCCACCGAGCCTTCTGCCCCTCCACCCAGCCCTCTACCTCTCCGACTAG

Function

NR:

description
patatin-like phospholipase domain-containing protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961089.1 True 789 mRNA 0.57 7 23752934 23766218

Neighbor

gene id symbol gene type direction distance location
LOC118944115 NA coding upstream 251257 23487167 ~ 23501677 (+)
LOC110503371 LOC106581229 coding upstream 357340 23388846 ~ 23395594 (+)
LOC110504039 LOC100380712 coding upstream 422869 23314175 ~ 23330065 (+)
LOC110504037 LOC106612964 coding upstream 565668 23152236 ~ 23187266 (+)
LOC110504034 LOC106612965 coding upstream 633466 23085042 ~ 23119468 (+)
LOC110503376 LOC106613110 coding downstream 26662 23792880 ~ 23795998 (+)
LOC110504048 NA coding downstream 88925 23855143 ~ 23888178 (+)
LOC118944003 NA coding downstream 170099 23936317 ~ 23952562 (+)
pipox pipox coding downstream 887756 24653974 ~ 24670701 (+)
LOC110503380 LOC106613089 coding downstream 1342882 25109100 ~ 25111398 (+)
G1915835 NA non-coding upstream 275 23752326 ~ 23752659 (+)
G1915833 NA non-coding upstream 3711 23748926 ~ 23749223 (+)
G1915826 NA non-coding upstream 8322 23744402 ~ 23744612 (+)
G1915778 NA non-coding upstream 37539 23715164 ~ 23715395 (+)
G1915776 NA non-coding upstream 38469 23713939 ~ 23714465 (+)
G1915868 LOC106612955 non-coding downstream 48421 23814639 ~ 23816814 (+)
G1915999 NA non-coding downstream 145263 23911481 ~ 23911684 (+)
G1916008 NA non-coding downstream 151470 23917688 ~ 23917908 (+)
G1916025 NA non-coding downstream 161082 23927300 ~ 23927701 (+)
G1916043 NA non-coding downstream 170534 23936752 ~ 23937101 (+)
G1915361 LOC106611080 other upstream 326862 23425189 ~ 23426072 (+)
G1913153 NA other upstream 1558327 22193790 ~ 22194607 (+)
sacs LOC106612984 other upstream 2091236 21648371 ~ 21683308 (+)
G1912565 LOC106612993 other upstream 2550485 21201136 ~ 21202449 (+)
G1911474 NA other upstream 3445542 20304763 ~ 20307392 (+)
G1916129 NA other downstream 246047 24012265 ~ 24012808 (+)
G1916588 NA other downstream 752142 24518360 ~ 24519017 (+)
G1916660 NA other downstream 875480 24641698 ~ 24642134 (+)
G1916811 NA other downstream 1158916 24925134 ~ 24927054 (+)
G1917109 NA other downstream 1620101 25386319 ~ 25387517 (+)

Expression


Co-expression Network