LOC110504098 (LOC106613118)


Basic Information

Item Value
gene id LOC110504098
gene name LOC106613118
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 26910083 ~ 26935725 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961092.1
CCATCCTTCAGAGATAAGTTTAACAAATAGAATTAAATACAATATTTATCATGTTTGTATTGAACGACTGGTGGAAACGATTACCTAAGGAGTACCGCCATTGCGCCAAGTGATGACGTAAGCGTCTAAGAAACAACAAGGCCAATTCGATCTATTTAGTTTTTGAAAGTTTTCCCACgtgcaaaaaaaacaaaagcaCGCGCACTGTATATTTCTAAGGATAATTGAAGTAAATACTATTTTtcgaaattattatttttaaataaatatattaggtCTATTTCTCTGAATTGTTATTCAATTAAGTTTTTCGCGGTGCCAATTCCATCTCGAGGGAGCTGGTTGAAGGGATGGTGGCATTTGAGCTCGCTCGAGCACAACGTGCCCATAgtcttttttctctcttccaTTTGGGCCTATTGGTTAGTGCCTTGGCACTCATTCATAGTGGAGGGCGGTTGAAATGCATGCAGCCAGGTAGAGGGGTGTTTGGGTAGAAcataaaatgtgtattttgtcATAAAGAGATAGCAATTATATCTGCTTTATTTGCTTAGCAGGGATGGGCACTGGCCCCCTCTAACCTACACTGACCTCCTTGTAGCTTAGTCTGTGTTGCCTGCATGATGTGGCATGATGTGGCATGACTGCAAAGTGGATGTGCACGAGGACAGTCCCCTCCCATAGCCTCCCGTGGTATCTCACTTCAAGTGGACCCTGTCGTTTTCATTACTATTTTAAATCGGTTTTAACTGGGGTTAATAGTTGGCCTATTCTAAGGGACACTGCATTGAGATACCACATAGGGCCCGCAGAGCATTCTAAACGCTACCGCTGGGTTAGCCCCCGCAGTGGATGCTTAGTCCCTCTCTAGGCAGGGTTGGCATGGTGATTTGCCGTTTACCTACGTTCTCTCCTTTCGACAGTGGCGGTCGACAGTCCTATGTTGCGCGTGGACTGGAGCGAAGCAAACTCTGTGTCTGACCTGGCGCTCTTGGGGAACACGCGGACCTGCTTGGCTCGCAGACACATTCGCCACGCGCCCCTAGACACACTGGACCACTACGAGGTAAATGTTGAAGACACCGTTGAAATGTTACCAAAATCGAGAAGAGCACTTACCATTCAAGAGATTGCGGCGTTAGCCAGATCTTCATTACATGGCATCTCCCAGGCGATGAAGGACCATGTGACACGGCCCACAGGCATGGCCCAGGGCAGGGTGGCCCACCTGATAGAGTGGAAGGGCTGGTGTAAGCCCACTGACACCCCCGCAGCTCTGGAGTCTGACTTCAACAACTACTCTGACCTCactgagggagaacaggaggCCCGCTTCGCTGCAGGTGTGGCGGAGCAGTTTGCCATAGCGGAGGCTAAGCTGAGAGCCTGGTCGTCTGTGGATGGAGATGACTCTAATGACGACTCGTATGATGAGGACTTCATTCCTGCCAACGAGCCCACAACACAAAGCACAGAGGTGCCTCCTTACCTGAGGGACATTCTTCAAAGTCAGGTGTGTCAGCACCTGGGTCTGCGGGGGCCGTGCTGTGagggggcaggaggaggagaggggggagagaggccctctccctcctccacagaCACCCTTTGCTCTAGCCTCTATAGCCTGAATGAGCAACACCCCTTACTGCGAGATCTCACCCATCACTGCTGCAACAACCACGGTAACACCGCCGAGCTGGCTGCTAAGATCCTCTCGGCCCTGCAAGGGGGGGAGGAGCTGCTGTTGGCCCGCCTCCAGAGGGTGGGGCAGGGGGTTCGAGGGGGAGGGGACTTCAACAACCTGGGGGGTGGGAGGAGCCGGACGGGGGGGGAGGAGTCACCTTGCTACTCTGTGACCTACTCCGAGACCTATCTGTCGCCCGGGGAAGACGAAGGTACGCCCTGCAAAGACTATGAGGGCACCGTGGgccagggagaaggagagcgcGAGGTGTACCCACCTGACTATGCCACCCACAGGAAGGAAGAAGCTCACGGATTGGCAAGTGGGGTTCAGTGCTCCAGCCACCCACAACAAGAAAGCGAGTGA
>TU2194781
GCTAGCCAAGGCCAAGTGACGCTAGTAGGCTAGAGCTACACGAAGAACGCGGGGCGACCCCTTGCTGGTGTATGGATTTCACTGGCGTGTGACGACGAGGGGGGAACCCCCACCAGCGGAGCGTAAAGCCAATGCTGCTGCCGCCGCCTCGTAGCCCAAGCAGACGTGCGCTGTCCAGCCGCGGTGGTGCTGAAACACCAGCATCGCTCCTTCCCTCAGTGACATAGGGAGAGAGGGGTTCGGTTAGGCTACAAACAGGTAGATTAATTTTGTAATAATAAAACTGCACAAAGACTACACAGAAGCCATGATGAAAATGCAGAACTTGCAAGCAAGCAAAGCAGTAACAAAAAGCAAGTGAAAACGGGGACGAACGTGCTGGACTTTTCCCCGCCCTCGGCGTCACTCGAGGGGTCTGAGCAGCACGCGGTATCCTTGCGGAACCCAGAGAAGACTCCCGGGAGAGAGAGACTTCCGATCTATAAGGTAAATGTTGAAGACACCGTTGAAATGTTACCAAAATCGAGAAGAGCACTTACCATTCAAGAGATTGCGGCGTTAGCCAGATCTTCATTACATGGCATCTCCCAGGCGATGAAGGACCATGTGACACGGCCCACAGGCATGGCCCAGGGCAGGGTGGCCCACCTGATAGAGTGGAAGGGCTGGTGTAAGCCCACTGACACCCCCGCAGCTCTGGAGTCTGACTTCAACAACTACTCTGACCTCactgagggagaacaggaggCCCGCTTCGCTGCAGGTGTGGCGGAGCAGTTTGCCATAGCGGAGGCTAAGCTGAGAGCCTGGTCGTCTGTGGATGGAGATGACTCTAATGACGACTCGTATGATGAGGACTTCATTCCTGCCAACGAGCCCACAACACAAAGCACAGAGGTGCCTCCTTACCTGAGGGACATTCTTCAAAGTCAGGTGTGTCAGCACCTGGGTCTGCGGGGGCCGTGCTGTGagggggcaggaggaggagaggggggagagaggccctctccctcctccacagaCACCCTTTGCTCTAGCCTCTATAGCCTGAATGAGCAACACCCCTTACTGCGAGATCTCACCCATCACTGCTGCAACAACCACGGTAACACCGCCGAGCTGGCTGCTAAGATCCTCTCGGCCCTGCAAGGGGGGGAGGAGCTGCTGTTGGCCCG

Function

NR:

description
protein FAM131A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961092.1 False 2056 mRNA 0.52 6 26910083 26932122
TU2194781 True 1175 TUCP 0.56 5 26910784 26935725

Neighbor

gene id symbol gene type direction distance location
LOC110504092 LOC106613119 coding downstream 14483 26886159 ~ 26895600 (-)
LOC110504093 NA coding downstream 287693 26616423 ~ 26622390 (-)
LOC110504088 LOC106581294 coding downstream 452945 26404705 ~ 26457138 (-)
LOC110503381 LOC106613064 coding downstream 668673 26208892 ~ 26241410 (-)
med17 med17 coding downstream 725466 26178734 ~ 26184617 (-)
LOC110504099 NA coding upstream 4211 26936333 ~ 26938461 (-)
LOC110504100 NA coding upstream 23661 26955783 ~ 27027806 (-)
LOC118944119 NA coding upstream 40986 26973108 ~ 26973161 (-)
LOC118944118 NA coding upstream 44989 26977111 ~ 26977240 (-)
LOC110504101 LOC106613117 coding upstream 96144 27028266 ~ 27043279 (-)
G1919335 NA non-coding downstream 5974 26902827 ~ 26904109 (-)
G1919365 NA non-coding downstream 73620 26836043 ~ 26836463 (-)
G1919286 NA non-coding downstream 168089 26723806 ~ 26741994 (-)
G1919136 NA non-coding downstream 422389 26487092 ~ 26487694 (-)
G1919132 NA non-coding downstream 432204 26477665 ~ 26477879 (-)
G1919425 NA non-coding upstream 17101 26949223 ~ 26949453 (-)
G1919448 NA non-coding upstream 115454 27047576 ~ 27047891 (-)
G1919613 LOC106584099 non-coding upstream 204997 27137119 ~ 27137543 (-)
G1919614 NA non-coding upstream 205732 27137854 ~ 27138464 (-)
G1919615 NA non-coding upstream 207402 27139524 ~ 27139750 (-)
LOC110504083 NA other downstream 744838 26163462 ~ 26165289 (-)
G1915836 NA other downstream 3157620 23751843 ~ 23752463 (-)
G1913663 NA other downstream 5037934 21871253 ~ 21872149 (-)
G1913665 NA other downstream 5045809 21863588 ~ 21864274 (-)
G1919707 NA other upstream 397328 27329450 ~ 27331899 (-)
G1920555 NA other upstream 1088208 28020330 ~ 28022222 (-)
G1920872 NA other upstream 1599921 28532043 ~ 28532321 (-)
LOC110504136 LOC106581357 other upstream 1911129 28842756 ~ 28844983 (-)
G1921283 NA other upstream 2011127 28943249 ~ 28944607 (-)

Expression


Co-expression Network