LOC110503243 (LOC106613311)


Basic Information

Item Value
gene id LOC110503243
gene name LOC106613311
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 36541463 ~ 36560736 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961763.1
GTTTTCCATAAAGACAAATAATTCCATTAATAgcaaaaatgcaaaaaaaaaccgGCTAATTTGAGTCGGCTACCGTCTGCAGCTAAACGGATACCACCCGTCGCCTCGAGCAATAAATGAACGTCAATCCCACGGTTACGTCAGTGAGGCAGAACTTGGGCAGGACAGAAGGTACGGTATTGTGGCATAATGTAGTTCACCTCCTTGGTAATGAGACATCGATAGCAGCGCATGTTTTCCACACGGTGAATGCCTTTTTATTTTATGCAAGAAGTTTGCGCAGAATAGTAAAGGTTCTGATAtcgttatttttttttaaacactcccGCAGGGTTGAACTTTTCAGCAGTGTATTTTTGGTCCTTCGTTTTTTCCGATTTATGGATGGAATTTATTGACAACAGACAATAATCCTGCGTGCTTCTTTTATTCATGTGTGTGTGCTGGTGACCGGTTACCATGGAGAAGCAGGCGGTGCAGAGGGCCAGGGAGGCTTTCCTCGCTGGGCGGTCGCGACCCCTGGAGTTCAGAGTTCAGCAgctcaagtctctccagaggatgatcacagacagacagggagagatcgCCACCGCCCTCAAACAGGACATCAACAGGAGCCAGTACGACACCCCGCTGTTTGAGTTGATCGGCCTGGAGAATGAGATCAGCCTGGCTGTGTCGAAGCTGGCCCAGTGGGCTGCTCCTCGGCCTGTAGAGAGGAACCTCCTCACCATCTCAGACCAGGCGTACATCCAGCCGGAGCCCCTGGGAGTGGTCCTCATTATCGGGGCCTGGAACTACCCCTGGGCCCTAACCCTGCAGCCCCTGGTCGGGGCTATCGCTGCAGgcaaTGCAGCTGTGGTGAAGCCGTCTGAGCTGAGTGAATACTCAGCTAGTCTCCTCAAAGCTCTGCTCCCACGATATCTGGACCAGGAGCTGTACCCTGTAGTGTGTGGGGGCGTGTCAGAGACTCAGGAGTTGCTGCGTCAGCGTTTCGACCACGTCTTCTACACAGGGAACAGCACTGTGGGTAAACTGGTGATGGAGGCAGCAGCCCGACATCTCACCCCCGTGACCCTGGAGCTAGGAGGGAAGAGCCCCTGTTATATCGATAAGGACGTCGACCTCAGAGTCGCATGCCGGCGTATCACGTGGGGGAAGTTTGTGAACTGTGGTCAGACGTGCATCGCCCCAGACTACATCCTGTGTGAACCCAGCATCCAGAACAGAGTGGTGGAGGGCATCCGGCAGACACTACTGGAGTTTTATGGGCCCGACCCCAAATCCTCCCCTGACTACGGCCGCATCATCAACCAGCGCCACTTCAACCGCTTGATGACTCTACTGGAGGGCTACACGGCAACAGTAGGGGGGCAGAGTGACTCATCACAGCGCTACATTGCCCCCACGGTGGTGAAGGACGTGCCCCCCCAGGCTAGGCTGATGCAGGAGGAGATCTTCGGCCCTCTGTTGCCCATAGTGACCGTCAGCGACATAGATGACGCCATCCACTTCATCAACGAGAGAGAGAAGCCCCTGGCGCTCTACGTCTTCTCCTCCAACAAGAAGGTGATAAAGCGAATGCTGGCTGAGACTACCAGTGGCGGGGTGACAGTCAACGACGTTATTATGCACTACACCCTCAACTCTCTGCCCTTTGGGGGTGTAGGTCAGAGTGGAACAGGAAGGTATCATGGAAAGCACACCTTTGACCAATTCAGCCATCATCGGGCGTGTCTGGTCAAGTCCCTGGGCATGGAGGAGGTCAACATCGTGCGGTACCCACCCCAGAACCGCCAGAAGGCTCGCAGGGTCAGGCTGGCCATGAGGACCCCACTGGTCGACTTCTCTTGGAAAACCTACATCTGGGCCGTGACGGCCACCGTCTTTGCTTTCGGTCTCTTTGTCACCTTGACTGCCATCCTGCTAATTGCTGGTGGCTTGAACTGCACCTGTTGGAGACTTTGGCAAATCTGGCGCTAGCTAGTCTTTACCTGTATTGGCCGACGTACATTCAACGAAAGACATGTCCCTGTGCCTGTGTCTGGTTCCCCTGGCTTTAGAATAATGTCTAATGTCTTTGTGTGTCCGACACTGTAACTAAACTCACAACCCTGGTGGTGTAAGCCCCTCCTGACTGTTGTTAGCGGTGTCAGCTTGCCATCACTGATCCTCTGTAATGACGACGAGCCACTGATTTTGCCCATGGCGAGCTGCTGTTTGCTTGCTAGATGTGTTTTTTTCTCATCTTCCGTTTTAATCTATAATTTCATTCAAATCTAACAGCCATTCTATGATTTATCTGTTTGTTCAAAGATTGTCAAAGAACTGAAAAATTTGATCTGTCTTTTATTGGAAAGGGGATGCCtaatcagttgcacaactgaatgcattcaaccaaaatgtgtcttccgcatttaacccccaacccctctgaatcagagagccACCTGACTGCTTTCACATATATCCTAACAATAATAGAAAAGGTTTGCTGGAATGGAAAGCGGTATACAGTAGCCAACATATGGAATCCTTGAATTTGGACTATGGTTGAAAAATTCCAGCAACTTTACCAAATGTTCCAGGTTTGCccaaaatcctggttggaagattcctaGATTTCTTGTTCAGTCCCTCCTGATTCCGAGAATCTTCCAACAGGGATTTCTGGTAACCCTGGGAAACTTGAACATCATAACGTCTAACATCTCTAACCCCATTCCACAGGTCAGAGTGGAACAGGAAGGTATCATGGAAAGCACACCTTTGACCAGTTCAGCCATCATCGGGCGTGTCTGGTCAAGTCCCTGGGCATGGAGGAGGTCCACATGGTGCGGTACCCACCCCAG
>XM_036961765.1
TTTTCCATAAAGACAAATAATTCCATTAATAgcaaaaatgcaaaaaaaaaccgGCTAATTTGAGTCGGCTACCGTCTGCAGCTAAACGGATACCACCCGTCGCCTCGAGCAATAAATGAACGTCAATCCCACGGTTACGTCAGTGAGGCAGAACTTGGGCAGGACAGAAGGTACGGTATTGTGGCATAATGTAGTTCACCTCCTTGGTAATGAGACATCGATAGCAGCGCATGTTTTCCACACGGTGAATGCCTTTTTATTTTATGCAAGAAGTTTGCGCAGAATAGTAAAGGTTCTGATAtcgttatttttttttaaacactcccGCAGGGTTGAACTTTTCAGCAGTGTATTTTTGGTCCTTCGTTTTTTCCGATTTATGGATGGAATTTATTGACAACAGACAATAATCCTGCGTGCTTCTTTTATTCATGTGTGTGTGCTGGTGACCGGTTACCATGGAGAAGCAGGCGGTGCAGAGGGCCAGGGAGGCTTTCCTCGCTGGGCGGTCGCGACCCCTGGAGTTCAGAGTTCAGCAgctcaagtctctccagaggatgatcacagacagacagggagagatcgCCACCGCCCTCAAACAGGACATCAACAGGAGCCAGTACGACACCCCGCTGTTTGAGTTGATCGGCCTGGAGAATGAGATCAGCCTGGCTGTGTCGAAGCTGGCCCAGTGGGCTGCTCCTCGGCCTGTAGAGAGGAACCTCCTCACCATCTCAGACCAGGCGTACATCCAGCCGGAGCCCCTGGGAGTGGTCCTCATTATCGGGGCCTGGAACTACCCCTGGGCCCTAACCCTGCAGCCCCTGGTCGGGGCTATCGCTGCAGgcaaTGCAGCTGTGGTGAAGCCGTCTGAGCTGAGTGAATACTCAGCTAGTCTCCTCAAAGCTCTGCTCCCACGATATCTGGACCAGGAGCTGTACCCTGTAGTGTGTGGGGGCGTGTCAGAGACTCAGGAGTTGCTGCGTCAGCGTTTCGACCACGTCTTCTACACAGGGAACAGCACTGTGGGTAAACTGGTGATGGAGGCAGCAGCCCGACATCTCACCCCCGTGACCCTGGAGCTAGGAGGGAAGAGCCCCTGTTATATCGATAAGGACGTCGACCTCAGAGTCGCATGCCGGCGTATCACGTGGGGGAAGTTTGTGAACTGTGGTCAGACGTGCATCGCCCCAGACTACATCCTGTGTGAACCCAGCATCCAGAACAGAGTGGTGGAGGGCATCCGGCAGACACTACTGGAGTTTTATGGGCCCGACCCCAAATCCTCCCCTGACTACGGCCGCATCATCAACCAGCGCCACTTCAACCGCTTGATGACTCTACTGGAGGGCTACACGGCAACAGTAGGGGGGCAGAGTGACTCATCACAGCGCTACATTGCCCCCACGGTGGTGAAGGACGTGCCCCCCCAGGCTAGGCTGATGCAGGAGGAGATCTTCGGCCCTCTGTTGCCCATAGTGACCGTCAGCGACATAGATGACGCCATCCACTTCATCAACGAGAGAGAGAAGCCCCTGGCGCTCTACGTCTTCTCCTCCAACAAGAAGGTGATAAAGCGAATGCTGGCTGAGACTACCAGTGGCGGGGTGACAGTCAACGACGTTATTATGCACTACACCCTCAACTCTCTGCCCTTTGGGGGTGTAGGTCAGAGTGGAACAGGAAGGTATCATGGAAAGCACACCTTTGACCAGTTCAGCCATCATCGGGCGTGTCTGGTCAAGTCCCTGGGCATGGAGGAGGTCCACATGGTGCGGTACCCACCCCAGAACCACCAGAAGGTTCGCAGGGTCAGGCTGGCCATGAGGACCCCACTGGTCGACTTCTCCAAGGGCACCTACATCTGGGCCGTCACGGCGTCCATTGTGGCTCTGGGACTCCTGATCGCCCTGACTGTGATTCTAATACTAGCGGCCGGTGTAAACTGCACCTGTTTGTGATTGATGGATAGACACAGTGAAGTTAAGGTTGCACATTTTGGTAACTTCCCCAAAATCTACCGGTATTC
>XM_036961766.1
TTTTCCATAAAGACAAATAATTCCATTAATAgcaaaaatgcaaaaaaaaaccgGCTAATTTGAGTCGGCTACCGTCTGCAGCTAAACGGATACCACCCGTCGCCTCGAGCAATAAATGAACGTCAATCCCACGGTTACGTCAGTGAGGCAGAACTTGGGCAGGACAGAAGGTACGGTATTGTGGCATAATGTAGTTCACCTCCTTGGTAATGAGACATCGATAGCAGCGCATGTTTTCCACACGGTGAATGCCTTTTTATTTTATGCAAGAAGTTTGCGCAGAATAGTAAAGGTTCTGATAtcgttatttttttttaaacactcccGCAGGGTTGAACTTTTCAGCAGTGTATTTTTGGTCCTTCGTTTTTTCCGATTTATGGATGGAATTTATTGACAACAGACAATAATCCTGCGTGCTTCTTTTATTCATGTGTGTGTGCTGGTGACCGGTTACCATGGAGAAGCAGGCGGTGCAGAGGGCCAGGGAGGCTTTCCTCGCTGGGCGGTCGCGACCCCTGGAGTTCAGAGTTCAGCAgctcaagtctctccagaggatgatcacagacagacagggagagatcgCCACCGCCCTCAAACAGGACATCAACAGGAGCCAGTACGACACCCCGCTGTTTGAGTTGATCGGCCTGGAGAATGAGATCAGCCTGGCTGTGTCGAAGCTGGCCCAGTGGGCTGCTCCTCGGCCTGTAGAGAGGAACCTCCTCACCATCTCAGACCAGGCGTACATCCAGCCGGAGCCCCTGGGAGTGGTCCTCATTATCGGGGCCTGGAACTACCCCTGGGCCCTAACCCTGCAGCCCCTGGTCGGGGCTATCGCTGCAGgcaaTGCAGCTGTGGTGAAGCCGTCTGAGCTGAGTGAATACTCAGCTAGTCTCCTCAAAGCTCTGCTCCCACGATATCTGGACCAGGAGCTGTACCCTGTAGTGTGTGGGGGCGTGTCAGAGACTCAGGAGTTGCTGCGTCAGCGTTTCGACCACGTCTTCTACACAGGGAACAGCACTGTGGGTAAACTGGTGATGGAGGCAGCAGCCCGACATCTCACCCCCGTGACCCTGGAGCTAGGAGGGAAGAGCCCCTGTTATATCGATAAGGACGTCGACCTCAGAGTCGCATGCCGGCGTATCACGTGGGGGAAGTTTGTGAACTGTGGTCAGACGTGCATCGCCCCAGACTACATCCTGTGTGAACCCAGCATCCAGAACAGAGTGGTGGAGGGCATCCGGCAGACACTACTGGAGTTTTATGGGCCCGACCCCAAATCCTCCCCTGACTACGGCCGCATCATCAACCAGCGCCACTTCAACCGCTTGATGACTCTACTGGAGGGCTACACGGCAACAGTAGGGGGGCAGAGTGACTCATCACAGCGCTACATTGCCCCCACGGTGGTGAAGGACGTGCCCCCCCAGGCTAGGCTGATGCAGGAGGAGATCTTCGGCCCTCTGTTGCCCATAGTGACCGTCAGCGACATAGATGACGCCATCCACTTCATCAACGAGAGAGAGAAGCCCCTGGCGCTCTACGTCTTCTCCTCCAACAAGAAGGTGATAAAGCGAATGCTGGCTGAGACTACCAGTGGCGGGGTGACAGTCAACGACGTTATTATGCACTACACCCTCAACTCTCTGCCCTTTGGGGGTGTAGGTCAGAGTGGAACAGGAAGGTATCATGGAAAGCACACCTTTGACCAGTTCAGCCATCATCGGGCGTGTCTGGTCAAGTCCCTGGGCATGGAGGAGGTCCACATGGCGGggtaagaaggatttttaagccttgagataattgagacatggattgtg
>XM_036961764.1
TCAGTGAGGCAGAACTTGGGCAGGACAGAAGGGTTGAACTTTTCAGCAGTGTATTTTTGGTCCTTCGTTTTTTCCGATTTATGGATGGAATTTATTGACAACAGACAATAATCCTGCGTGCTTCTTTTATTCATGTGTGTGTGCTGGTGACCGGTTACCATGGAGAAGCAGGCGGTGCAGAGGGCCAGGGAGGCTTTCCTCGCTGGGCGGTCGCGACCCCTGGAGTTCAGAGTTCAGCAgctcaagtctctccagaggatgatcacagacagacagggagagatcgCCACCGCCCTCAAACAGGACATCAACAGGAGCCAGTACGACACCCCGCTGTTTGAGTTGATCGGCCTGGAGAATGAGATCAGCCTGGCTGTGTCGAAGCTGGCCCAGTGGGCTGCTCCTCGGCCTGTAGAGAGGAACCTCCTCACCATCTCAGACCAGGCGTACATCCAGCCGGAGCCCCTGGGAGTGGTCCTCATTATCGGGGCCTGGAACTACCCCTGGGCCCTAACCCTGCAGCCCCTGGTCGGGGCTATCGCTGCAGgcaaTGCAGCTGTGGTGAAGCCGTCTGAGCTGAGTGAATACTCAGCTAGTCTCCTCAAAGCTCTGCTCCCACGATATCTGGACCAGGAGCTGTACCCTGTAGTGTGTGGGGGCGTGTCAGAGACTCAGGAGTTGCTGCGTCAGCGTTTCGACCACGTCTTCTACACAGGGAACAGCACTGTGGGTAAACTGGTGATGGAGGCAGCAGCCCGACATCTCACCCCCGTGACCCTGGAGCTAGGAGGGAAGAGCCCCTGTTATATCGATAAGGACGTCGACCTCAGAGTCGCATGCCGGCGTATCACGTGGGGGAAGTTTGTGAACTGTGGTCAGACGTGCATCGCCCCAGACTACATCCTGTGTGAACCCAGCATCCAGAACAGAGTGGTGGAGGGCATCCGGCAGACACTACTGGAGTTTTATGGGCCCGACCCCAAATCCTCCCCTGACTACGGCCGCATCATCAACCAGCGCCACTTCAACCGCTTGATGACTCTACTGGAGGGCTACACGGCAACAGTAGGGGGGCAGAGTGACTCATCACAGCGCTACATTGCCCCCACGGTGGTGAAGGACGTGCCCCCCCAGGCTAGGCTGATGCAGGAGGAGATCTTCGGCCCTCTGTTGCCCATAGTGACCGTCAGCGACATAGATGACGCCATCCACTTCATCAACGAGAGAGAGAAGCCCCTGGCGCTCTACGTCTTCTCCTCCAACAAGAAGGTGATAAAGCGAATGCTGGCTGAGACTACCAGTGGCGGGGTGACAGTCAACGACGTTATTATGCACTACACCCTCAACTCTCTGCCCTTTGGGGGTGTAGGTCAGAGTGGAACAGGAAGGTATCATGGAAAGCACACCTTTGACCAATTCAGCCATCATCGGGCGTGTCTGGTCAAGTCCCTGGGCATGGAGGAGGTCAACATCGTGCGGTACCCACCCCAGAACCGCCAGAAGGCTCGCAGGGTCAGGCTGGCCATGAGGACCCCACTGGTCGACTTCTCTTGGAAAACCTACATCTGGGCCGTGACGGCCACCGTCTTTGCTTTCGGTCTCTTTGTCACCTTGACTGCCATCCTGCTAATTGCTGGTGGCTTGAACTGCACCTGTTGGAGACTTTGGCAAATCTGGCGCTAGCTAGTCTTTACCTGTATTGGCCGACGTACATTCAACGAAAGACATGTCCCTGTGCCTGTGTCTGGTTCCCCTGGCTTTAGAATAATGTCTAATGTCTTTGTGTGTCCGACACTGTAACTAAACTCACAACCCTGGTGGTGTAAGCCCCTCCTGACTGTTGTTAGCGGTGTCAGCTTGCCATCACTGATCCTCTGTAATGACGACGAGCCACTGATTTTGCCCATGGCGAGCTGCTGTTTGCTTGCTAGATGTGTTTTTTTCTCATCTTCCGTTTTAATCTATAATTTCATTCAAATCTAACAGCCATTCTATGATTTATCTGTTTGTTCAAAGATTGTCAAAGAACTGAAAAATTTGATCTGTCTTTTATTGGAAAGGGGATGCCtaatcagttgcacaactgaatgcattcaaccaaaatgtgtcttccgcatttaacccccaacccctctgaatcagagagccACCTGACTGCTTTCACATATATCCTAACAATAATAGAAAAGGTTTGCTGGAATGGAAAGCGGTATACAGTAGCCAACATATGGAATCCTTGAATTTGGACTATGGTTGAAAAATTCCAGCAACTTTACCAAATGTTCCAGGTTTGCccaaaatcctggttggaagattcctaGATTTCTTGTTCAGTCCCTCCTGATTCCGAGAATCTTCCAACAGGGATTTCTGGTAACCCTGGGAAACTTGAACATCATAACGTCTAACATCTCTAACCCCATTCCACAGGTCAGAGTGGAACAGGAAGGTATCATGGAAAGCACACCTTTGACCAGTTCAGCCATCATCGGGCGTGTCTGGTCAAGTCCCTGGGCATGGAGGAGGTCCACATGGTGCGGTACCCACCCCAG

Function

NR:

description
PREDICTED: fatty aldehyde dehydrogenase-like isoform X1

GO: NA

KEGG:

id description
K00128 ALDH; aldehyde dehydrogenase (NAD+)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961763.1 False 2852 mRNA 0.51 11 36541463 36555361
XM_036961765.1 False 2029 mRNA 0.54 11 36541464 36555600
XM_036961766.1 False 1823 mRNA 0.53 12 36541464 36560736
XM_036961764.1 True 2552 mRNA 0.52 12 36541603 36555361

Neighbor

gene id symbol gene type direction distance location
bud23 wbscr22 coding upstream 28979 36505888 ~ 36512484 (+)
LOC110517470 sh2b2 coding upstream 43179 36434958 ~ 36498284 (+)
LOC110503435 LOC106581515 coding upstream 127722 36255892 ~ 36413741 (+)
LOC110503252 LOC106581503 coding upstream 323133 36180559 ~ 36218330 (+)
wdr53 wdr53 coding upstream 374999 36163343 ~ 36166464 (+)
LOC110503266 LOC106613355 coding downstream 113086 36673822 ~ 36749629 (+)
LOC110503269 LOC106613363 coding downstream 367175 36927911 ~ 36933490 (+)
LOC110503268 LOC106613360 coding downstream 382159 36942895 ~ 36960462 (+)
LOC110503264 LOC106581527 coding downstream 425137 36985873 ~ 37079320 (+)
urb1 urb1 coding downstream 564959 37125695 ~ 37191160 (+)
G1928330 NA non-coding upstream 7242 36359519 ~ 36534221 (+)
G1928381 NA non-coding upstream 19168 36521929 ~ 36522295 (+)
G1928379 NA non-coding upstream 38438 36502543 ~ 36503025 (+)
G1928369 NA non-coding upstream 76718 36463994 ~ 36464745 (+)
G1928396 NA non-coding downstream 1481 36562217 ~ 36565350 (+)
G1928398 NA non-coding downstream 9869 36570605 ~ 36571826 (+)
G1928408 NA non-coding downstream 38503 36599239 ~ 36600585 (+)
G1928432 NA non-coding downstream 107309 36668045 ~ 36668382 (+)
G1928434 NA non-coding downstream 111932 36672668 ~ 36672898 (+)
G1928169 NA other upstream 370992 36141229 ~ 36170471 (+)
G1928170 NA other upstream 372134 36166626 ~ 36169329 (+)
G1927540 NA other upstream 1159594 35379902 ~ 35381869 (+)
LOC110503217 LOC106613270 other upstream 1904340 34501674 ~ 34638201 (+)
G1926351 NA other upstream 2459728 34079223 ~ 34082461 (+)
G1928430 NA other downstream 101138 36661874 ~ 36662497 (+)
LOC110503265 scaf4 other downstream 641123 37193636 ~ 37239498 (+)
LOC110503436 tiam1 other downstream 730926 37291589 ~ 37375534 (+)

Expression


Co-expression Network