LOC110503268 (LOC106613360)


Basic Information

Item Value
gene id LOC110503268
gene name LOC106613360
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 36942895 ~ 36960462 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021581639.2
TTGCTTGGTTGAGGGGCGGTAGCTGAGGGGCGGTCCTGAATCTGTAGGCTCTCTGAACATTTTAAACACAGCAATCTTCCTTCCTTGACTTTCAACCGAACAGTGATTACTTCCAAGCCTAGAGAGGTAGATAAAGATAATTCGTACCAGGCCCTATACTTCTAAATATCACGTGATTTTGGCGCGACACTGGCAGCCAGAAAGTCGGGATGAGACGTTTTCCGTTTGTTGACATTGTTATGGTTCAGTTTTGTTGAACTATGCCTAAAGCTGCAAACCATCTTGATAGATGCCGTCTCTGCGACCAAAATCTAAGGATATTTGGTACGCTCCAACATGTGCGTTCCCTTGTGTCAAAGTCGAATTGTACCATTCTGACTAGGTTATCATCACTCGGCATAAACCTGACACTGCACGAAGATACATCGACAATTATATGTCAGAAGTGTTTTCGTAACATTTGTAAGGTTGAAAAGACCATGCATGTGTTACATGCATGGAAAGCTACAACGCAAACACCGGCGTTTGGAACTCCCGGGGAAGAAGTTATCAAGTCCCAACAAGGCCCAGTAGAGACCGGAAGAGACGATACCAAGACCAGGTGTTTTAACTGTGATTCCTTGAATGAGGTACCCGAGAAGAAACGTCAACGGGAAGAAAGCCCACCAACTACAGGCAGGGGTGCCAAGAAGAGATGCAATGCCTCTACACAATCCCCAGAGAAGAACATTATGGTTGAGGTTGTCATTACATACAACCCAAAATTGAGTCATCCAAAACCAGGAGTCGGTTCCCCTGACAACAAGGGAAGGATGTGGAAACAGAAGAGGAAGGTAATTGCTTCAGAATTTTCGGGCATGATTGAAAACTTGGCTATGGGCAATATGGTGACTTTTGCAAAATTAGCCTTGACAAATGAGAACATATCCCAAGAAATCAGAAAGCAAATTGTAAATAAAATCCAAGTGGAGGTCAAGGCATATGCAAGCCTCCCTAATGTTTTTGAACCGTGCATCTTGAGCAGTACCTCGTTGGAGAAAATGAAGTATTTTTCATACGAAGCGTTGGATAATGAGTTGTCCAGGAAGACACCGTGGCTTTATACCACCATCAATACTGCAACAGGTGGTTCCACCATCCATAACTGTGTGGCTGCCTCTGTGGCCCTGAGAGGTAGAAACCCCAGGCTTTCTGCACTGGCCTATGTCATCAACTCAACACTGACCCAAGGGGGGGTTAAGCCCATTTTCAAAAGACTCTCTAAAATGGGCATTGTAACATCATACCAATGTGCCAGCAGTAAGCAGAAGGAGATGAAGGCAGCTGggtacaacatcaacatcaaatgCTGGAGGGAGGACTGTGAGCTGTTTTTCCAACATAGTGTCAGCGGTGAAGTCTGCCCACGACCTCCTCCTACGGCTAAACCGACAGAGGAGACCGGAAGAGTGGAGGACGAGGAGAAAGCTAAAGTGGAGGTTGGGGGTCCAGTGGAGGAAGAGTGGGGTTTCCTGCTAGGAGAGACAGAAACTGAGGAAGACAGAGGATCAACagtacaggaagagagaggagaggagaaaggcagtGGTTCCCTGctaggagagacagaaacagaggaggacagaggatcaACAGtacatgaagagagaggagaggagaaagacaggggTTCCCTGctaggagagacagaaacagaggaagacagaggatcAACAGtacatgaagagagaggagaggagaaagacaggtGTTCCCTGctaggagagacagaaacagaggaagTGGGACATGCATCATCAGCACTACAAGGAAATGACACACAGGAAGAGGACTCTGATTCAGCGGTGGATTCAGAGACGGAATACTTTGGATTAAACCTCACTTGTGAGAGTGATTAGAGAAGTAGCCTAACAAAGAGTCTGTAGATGACAGAtctaggcctaggctacatctcTGAACAACAAGGGACTAATCATAGTTTGGGTACCAACTTACAATACAGATGGTGACACATTGAACTGTACTTCTTAACATGGTCATAAATATGATACACCGAGTGTTATAAGACTGTATGACATCTTGTGTCACTGAATGTCAATTGCCGTTTTATCATGTATTGGAAATCAGTTTTAGAGAATAAAAATGCTTTGCCTTTTT

Function

NR:

description
uncharacterized protein LOC110503268

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021581639.2 True 2157 mRNA 0.45 2 36942895 36960462

Neighbor

gene id symbol gene type direction distance location
LOC110503269 LOC106613363 coding upstream 9405 36927911 ~ 36933490 (+)
LOC110503266 LOC106613355 coding upstream 193266 36673822 ~ 36749629 (+)
LOC110503243 LOC106613311 coding upstream 382159 36541463 ~ 36560736 (+)
bud23 wbscr22 coding upstream 430411 36505888 ~ 36512484 (+)
LOC110517470 sh2b2 coding upstream 444611 36434958 ~ 36498284 (+)
LOC110503264 LOC106581527 coding downstream 25411 36985873 ~ 37079320 (+)
urb1 urb1 coding downstream 165233 37125695 ~ 37191160 (+)
LOC118944028 NA coding downstream 178176 37138638 ~ 37139270 (+)
LOC110503265 scaf4 coding downstream 233174 37193636 ~ 37239498 (+)
LOC118944105 NA coding downstream 284015 37244477 ~ 37291414 (+)
G1928545 NA non-coding upstream 18120 36923383 ~ 36924775 (+)
G1928498 NA non-coding upstream 85658 36839759 ~ 36857237 (+)
G1928436 NA non-coding upstream 190229 36752057 ~ 36752666 (+)
G1928458 NA non-coding upstream 200511 36741820 ~ 36742384 (+)
G1928456 NA non-coding upstream 215752 36726314 ~ 36727143 (+)
G1928579 NA non-coding downstream 46584 37007046 ~ 37007707 (+)
G1928584 NA non-coding downstream 56212 37016674 ~ 37020415 (+)
G1928586 NA non-coding downstream 76106 37036568 ~ 37038709 (+)
G1928618 NA non-coding downstream 163522 37123984 ~ 37124641 (+)
G1928623 NA non-coding downstream 169213 37129675 ~ 37132501 (+)
G1928430 NA other upstream 280398 36661874 ~ 36662497 (+)
G1928169 NA other upstream 772424 36141229 ~ 36170471 (+)
G1928170 NA other upstream 773566 36166626 ~ 36169329 (+)
G1927540 NA other upstream 1561026 35379902 ~ 35381869 (+)
LOC110503217 LOC106613270 other upstream 2305772 34501674 ~ 34638201 (+)
LOC110503436 tiam1 other downstream 331200 37291589 ~ 37375534 (+)
G1928752 NA other downstream 474441 37434903 ~ 37435441 (+)

Expression


Co-expression Network