XLOC_037994 (gpa33b)


Basic Information

Item Value
gene id XLOC_037994
gene name gpa33b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 34307140 ~ 34308113 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074553
gTCCTTTTTGGTAACTACTACTCCAATACTAATAAAGTAGACATTGATCCTCAATATGTAAACAGAGTCTCAATAGAAACAGACCTTACCACAAAAACATCAACGCTAACAATAAAGCAAGTCACTCAGAAGGAAAGCAGAAAAATTAGATGTTATGTTCAGATCCCTGGAGACATCGAAGGCAAACCAGCAGACACTACTTTTCTTTTGGTTCAGGTTGCACCATCACAGCCTGTCTGTAAAGTAGTAGGAACAGCAGAATACGGACACAATATTAGCCTAACCTGTGTCTCTGAGGAAGGTTCACCAGTACCTACATACAAATGGGAGAGATATAGCGTCAAAAATGTCCCACAAGGGTTTCCTATCAAAACCACTGAGAAGGATGGAGTTCTGTCGTTGGTCAATGTATCAAGTGAGACGTCAGGTTACTATATTTGCCTGTCAAGCAATAAGGTTGGATCAGCTAAATGTAACATGACATTGTCCGTTC

Function

symbol description
gpa33b Predicted to be integral component of plasma membrane. Orthologous to human GPA33 (glycoprotein A33).

GO:

id name namespace
GO:0005887 integral component of plasma membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-194 Predicted to be integral component of plasma membrane. Orthologous to human GPA33 (glycoprotein A33).

Ensembl:

ensembl_id ENSDARG00000040898

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074553 True 493 mRNA 0.40 3 34307140 34308113

Neighbor

gene id symbol gene type direction distance location
XLOC_037993 ildr2 coding downstream 6433 34274501 ~ 34300707 (-)
XLOC_037992 ildr1b coding downstream 38074 34260604 ~ 34269066 (-)
XLOC_037991 me3 coding downstream 46926 34246384 ~ 34260214 (-)
XLOC_037990 dcaf6 coding downstream 87775 34166064 ~ 34219365 (-)
XLOC_037989 slc35a5 coding downstream 185301 34112067 ~ 34121839 (-)
XLOC_037995 BX294189.1 coding upstream 18317 34326430 ~ 34328502 (-)
XLOC_037996 NA coding upstream 42404 34350517 ~ 34355550 (-)
XLOC_037997 cd247l coding upstream 48782 34356895 ~ 34368842 (-)
XLOC_037998 grtp1b coding upstream 81863 34389976 ~ 34396264 (-)
XLOC_037999 ppp2r3b coding upstream 176341 34484454 ~ 34509997 (-)
XLOC_037988 NA non-coding downstream 223914 34069736 ~ 34083226 (-)
XLOC_037987 NA non-coding downstream 241534 34064509 ~ 34065606 (-)
XLOC_037985 dre-mir-222a non-coding downstream 351201 33921464 ~ 33955939 (-)
XLOC_037986 NA non-coding downstream 364004 33942193 ~ 33943136 (-)
XLOC_037984 dre-mir-221 non-coding downstream 386116 33920932 ~ 33921024 (-)
XLOC_038000 NA non-coding upstream 238553 34546666 ~ 34587807 (-)
XLOC_038001 NA non-coding upstream 283913 34592026 ~ 34812883 (-)
XLOC_038002 BX601644.5 non-coding upstream 444931 34753044 ~ 34753159 (-)

Expression


Co-expression Network