Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944103 |
| gene name | LOC106613334 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 37984081 ~ 38021354 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036962048.1 | False | 4029 | mRNA | 0.55 | 5 | 37984119 | 38021354 |
| TU2208184 | True | 422 | lncRNA | 0.46 | 2 | 37984081 | 37985425 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tgfb1a | tgfb1b | coding | downstream | 68103 | 37873005 ~ 37916016 (-) |
| LOC110503255 | LOC106613338 | coding | downstream | 265847 | 37679493 ~ 37718272 (-) |
| LOC118944019 | NA | coding | downstream | 291889 | 37689230 ~ 37692230 (-) |
| LOC110503256 | LOC106613340 | coding | downstream | 305029 | 37664514 ~ 37679090 (-) |
| wdr62 | LOC106613339 | coding | downstream | 319830 | 37599847 ~ 37664289 (-) |
| LOC118944071 | leg4 | coding | upstream | 105012 | 38126366 ~ 38168485 (-) |
| LOC110503258 | LOC105027022 | coding | upstream | 162827 | 38184181 ~ 38196994 (-) |
| ryr1b | LOC103368738 | coding | upstream | 181386 | 38202740 ~ 38436340 (-) |
| hnrnpul1 | LOC105027039 | coding | upstream | 510074 | 38531428 ~ 38570785 (-) |
| opa3 | opa3 | coding | upstream | 556571 | 38577925 ~ 38584847 (-) |
| G1930614 | NA | non-coding | downstream | 1855 | 37981722 ~ 37982264 (-) |
| G1930610 | NA | non-coding | downstream | 12608 | 37971150 ~ 37971511 (-) |
| G1930601 | NA | non-coding | downstream | 37752 | 37946132 ~ 37946367 (-) |
| G1930593 | NA | non-coding | downstream | 69639 | 37913804 ~ 37914480 (-) |
| G1930587 | NA | non-coding | downstream | 94506 | 37889246 ~ 37889613 (-) |
| G1930654 | NA | non-coding | upstream | 55230 | 38076584 ~ 38126994 (-) |
| G1930682 | NA | non-coding | upstream | 93333 | 38114687 ~ 38115149 (-) |
| G1930717 | NA | non-coding | upstream | 223775 | 38245129 ~ 38246172 (-) |
| G1930748 | NA | non-coding | upstream | 314293 | 38335647 ~ 38402368 (-) |
| G1930391 | LOC103149469 | other | downstream | 679654 | 37304014 ~ 37304465 (-) |
| G1930343 | NA | other | downstream | 766053 | 37216638 ~ 37218332 (-) |
| G1930333 | NA | other | downstream | 782196 | 37201438 ~ 37201923 (-) |
| G1930026 | LOC106613311 | other | downstream | 1426235 | 36554184 ~ 36557884 (-) |
| G1927929 | NA | other | downstream | 2193534 | 35789266 ~ 35790585 (-) |
| G1930684 | NA | other | upstream | 96470 | 38117824 ~ 38118432 (-) |
| G1930800 | NA | other | upstream | 451676 | 38473030 ~ 38474008 (-) |
| G1930841 | NA | other | upstream | 559063 | 38580417 ~ 38582296 (-) |
| G1930859 | NA | other | upstream | 631197 | 38616137 ~ 38656202 (-) |
