Item | Value |
---|---|
gene id | ppp1r13l |
gene name | ppp1r13l |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048588.1 |
NCBI id | CM023242.2 |
chromosome length | 45930806 |
location | 38590146 ~ 38653011 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
ppp1r13l | Predicted to be involved in positive regulation of cell differentiation and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within apoptotic process and transcription, DNA-templated. Orthologous to human PPP1R13L (protein phosphatase 1 regulatory subunit 13 like). |
description |
---|
relA-associated inhibitor |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036961980.1 | False | 3254 | mRNA | 0.56 | 14 | 38590146 | 38653011 |
XM_036961981.1 | False | 3327 | mRNA | 0.56 | 14 | 38590159 | 38653011 |
XM_036961984.1 | False | 3325 | mRNA | 0.56 | 15 | 38590159 | 38653011 |
TU2206306 | True | 479 | TUCP | 0.54 | 4 | 38590181 | 38635392 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110503272 | NA | coding | upstream | 62379 | 38526884 ~ 38527767 (+) |
rasgrp4 | rasgrp4 | coding | upstream | 66980 | 38463435 ~ 38523166 (+) |
LOC110511668 | LOC106591056 | coding | upstream | 468368 | 38039863 ~ 38121778 (+) |
LOC118944107 | NA | coding | upstream | 611016 | 37976645 ~ 37979130 (+) |
LOC110511319 | LOC106613336 | coding | upstream | 616600 | 37946663 ~ 37973546 (+) |
LOC118944104 | NA | coding | downstream | 67771 | 38711025 ~ 38736584 (+) |
tmem91 | tmem91 | coding | downstream | 84458 | 38737469 ~ 38757769 (+) |
bckdha | bckdha | coding | downstream | 117829 | 38770840 ~ 38793470 (+) |
bicra | LOC106613370 | coding | downstream | 192471 | 38845482 ~ 38932575 (+) |
ehd2b | LOC106613377 | coding | downstream | 290413 | 38943424 ~ 38977744 (+) |
G1929213 | NA | non-coding | upstream | 14780 | 38573794 ~ 38575366 (+) |
G1929174 | NA | non-coding | upstream | 19411 | 38569877 ~ 38570735 (+) |
G1929177 | NA | non-coding | upstream | 24218 | 38564807 ~ 38565928 (+) |
G1929200 | NA | non-coding | upstream | 43345 | 38545676 ~ 38546801 (+) |
G1929175 | NA | non-coding | upstream | 65668 | 38523951 ~ 38524478 (+) |
G1929286 | NA | non-coding | downstream | 28793 | 38681804 ~ 38692641 (+) |
G1929284 | NA | non-coding | downstream | 29212 | 38682223 ~ 38689024 (+) |
G1929299 | NA | non-coding | downstream | 69136 | 38722147 ~ 38722615 (+) |
G1929291 | NA | non-coding | downstream | 109380 | 38762391 ~ 38763052 (+) |
G1929196 | NA | other | upstream | 77041 | 38509846 ~ 38513105 (+) |
G1929037 | NA | other | upstream | 391622 | 38197898 ~ 38198524 (+) |
G1928851 | NA | other | upstream | 955987 | 37633215 ~ 37634159 (+) |
G1928756 | NA | other | upstream | 1125508 | 37445561 ~ 37464638 (+) |
spred3 | spred3 | other | downstream | 367822 | 39020800 ~ 39049676 (+) |
G1929664 | NA | other | downstream | 894801 | 39547812 ~ 39549780 (+) |
G1929808 | NA | other | downstream | 1221267 | 39874278 ~ 39877275 (+) |
G1929816 | NA | other | downstream | 1235316 | 39888327 ~ 39889155 (+) |
G1929269 | NA | non-coding | downstream | 8589 | 38643981 ~ 38645671 (+) |