XLOC_037997 (cd247l)


Basic Information

Item Value
gene id XLOC_037997
gene name cd247l
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 34356895 ~ 34368842 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074557
ACTTACAGGCCAAGCAACAGGAAGGTTCAGCATTTCAGGGAATGTTATGGAAATGAGCAGGACAAGCACTCTATTGTTGTTGGCCTCATGTGTGTCCTCTGCAGAGGCCACTGTAAGCGACCCGACTTACTGCTACATTTTAGATGTTATTCTGCTGGTGTACTCCATCATTTTTACCGCTCTCTACTTTCGAGAGAAGTTTTTAAAAGAAGGGCCCGTTCCTCCAGATCCTGCAGCTCCGGTCCGTAACCCCAATGAGCCCGTCTATACAGACTTAGATCTACCTCAGGTGGGCTCCGATTATCAACAACTGGACAGACCGATTAGAAGACGAGAACCAGAGACACATTATCAGGAACTGAGAGCACATGCGAGTGATGAATACCAGCAAATAGGAACTAAAGGAAAACCACGCAAAGCCAAGAGCAAATCTAATGAGGGCCGAACAGGGAGAAAAAGGGACGCAGCTGAGGCTGTGGAGATGGAAACGTTTCCTACTGTATGAACACACAGCAAAGACGGAGGAGCAACTTGTAAATCTGCCAACAGATAAATTATATATCTTTGTAGGATGCACTTGTGTCTTGATTTCTGTATTTGTTACACAGCTAGTATGAATAATCAGTATTTTGCAGTCTTGCTTgtataaacgcacacacacaccgttTAAAAGACTGCGGTCAGtaagaagcaaaaaaaatctcAGCAAGGACAGATTCAATTGATGAGAAATTAAAGCTGtaaataatattgttataaatTGTATTGTTTTGAGAATTTTATTCATGAATTTGAGCATCAGCTTTAAAAAAGGCCTTTTTTACCTCCTGTTTTCCCCGAATGtacagtcaggtccataaatcttgggacattgacacaattctaacatttttggctct

Function

symbol description
cd247l Predicted to enable IgE receptor activity. Predicted to act upstream of or within cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of Fc-epsilon receptor I complex. Is expressed in hematopoietic cell; liver; and pleuroperitoneal region.

GO:

id name namespace
GO:0007166 cell surface receptor signaling pathway biological_process
GO:0032998 Fc-epsilon receptor I complex cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0019767 IgE receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070508-2 Predicted to enable IgE receptor activity. Predicted to act upstream of or within cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of Fc-epsilon receptor I complex. Is expressed in hematopoietic cell; liver; and pleuroperitoneal region.

Ensembl:

ensembl_id ENSDARG00000077240

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074557 True 899 mRNA 0.42 8 34356895 34368842

Neighbor

gene id symbol gene type direction distance location
XLOC_037996 NA coding downstream 1345 34350517 ~ 34355550 (-)
XLOC_037995 BX294189.1 coding downstream 28393 34326430 ~ 34328502 (-)
XLOC_037994 gpa33b coding downstream 48782 34307140 ~ 34308113 (-)
XLOC_037993 ildr2 coding downstream 56188 34274501 ~ 34300707 (-)
XLOC_037992 ildr1b coding downstream 87829 34260604 ~ 34269066 (-)
XLOC_037998 grtp1b coding upstream 21134 34389976 ~ 34396264 (-)
XLOC_037999 ppp2r3b coding upstream 115612 34484454 ~ 34509997 (-)
XLOC_038000 NA coding upstream 177824 34546666 ~ 34587807 (-)
XLOC_038001 NA coding upstream 223184 34592026 ~ 34812883 (-)
XLOC_038002 BX601644.5 coding upstream 384202 34753044 ~ 34753159 (-)
XLOC_037988 NA non-coding downstream 273669 34069736 ~ 34083226 (-)
XLOC_037987 NA non-coding downstream 291289 34064509 ~ 34065606 (-)
XLOC_037985 dre-mir-222a non-coding downstream 400956 33921464 ~ 33955939 (-)
XLOC_038004 BX601644.3 non-coding upstream 480018 34848860 ~ 34851804 (-)
XLOC_038016 NA non-coding upstream 1312126 35680968 ~ 35832754 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000009_03292206_03295043 NA coding CI01000009 null 3292206 ~ 3295043 (-)