LOC118944096


Basic Information

Item Value
gene id LOC118944096
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 40023797 ~ 40025161 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039403.1
agtggaggagtgggtcAGGAGGGTAGCGGAGTGGtgggtcaggagaggagagagcatcaGGGAACGGTGTGTGTGCCATGTTTCAGGGTTTTAATAGATGAGTATGAATCACAGGATCTGTGAGGCACGGGTCATTACAAAGCATTTACAGTGTATCGAAGTAGATCAAGTCGTTTACTTGCAATAATAAGAGAACATGCCTCGTTATACAGTTACCGCACAGTcattattttagtcatttagaatTAATAATTTTTAAATCCTAATTCTGGTCATCCTTAAATCTGCATTATGGATTCTGTATCCAGCTTCAATCCCTTTGAATCACTGTTACTGTAATCTGAGGTGGCAGCAGTACATATCAGAGTTAACTGTTACTGTATTCTGAGGTGGCAGCAGTACATATCAGAGTTAACTGTTACTGTATTCTGAGGTGGCAGCAGTACATATCAGAGTTAACTGTTACTGTATTCTGAGGTGGCAGCAGTACATATCAGAGTTAACTGTTACTGTAATCTGAGGTGGCAGCAGTACATATCAGAGTTCACTGTTACTGTAATCTGAGGTGGCAGCAGTACATATCAGAGTTCACTGTTACTGTATTCTGAGGTGGCAGCAGTACATATCAGAGTTCACTGTTACTGTATTCTGAGGTGGCAGCAGTACATATCAGAGTTAACTGTTACTGTATTCTGAGGTGGCAGCAGTACATATCAGAGTTCACTGTTACTGTATTCTGAGGTGGCAGCAGTACATATCAGAGTTAACTGTTACTGTAATCTGAGGTGGCAGCAGTACATATCAGAGTTAACTGTTACTGTAATCTGAGGTGGCAGCAGTACATATCAGAGTTAACTGTTACTGTAATCTGAGGTGGCAGCAGTACATATCAGAGTTCACTGTTACTGTATTCTGAGGTGGCAGCAGTACATATCAGAGTTAACTGTTACTGTATTCTGAGGTGGCAGCAGTACATATCAGAGTTCACTGTTACTGTATTCTGAGGTGGCAGCAGTACATATCAGAGTTAACTGTTACTGTAATCTGAGGTGGCAGCAGTACATATCAGAGTTAACTGTTACTGTAATCTGAGGTGGCAGCAGTACATATCAGAGTTAACTGTTACTGTAATCTGAGGTGGCAGCAGTACATATCAGAGTTCACTGTTACTGTAATCCGAGGTGGCAGCAGTACATATCAGAGTTATTGTAATAATCTCACGAGGAAGCGTTGCACAATAAATAACCAGACGACAATAATTTCTACTAGGTACCAGGTAGCTAGACCTCatagtgaaacagagagaggcgGTTTAAGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039403.1 True 1321 mRNA 0.41 2 40023797 40025161

Neighbor

gene id symbol gene type direction distance location
LOC110503195 LOC106613241 coding downstream 22137 39984918 ~ 40001660 (-)
LOC110503477 LOC106613202 coding downstream 40363 39817311 ~ 39983434 (-)
LOC110503196 LOC106613240 coding downstream 43267 39873196 ~ 39980530 (-)
LOC110503404 LOC106613235 coding downstream 226710 39668896 ~ 39797087 (-)
LOC110503200 LOC106613236 coding downstream 362133 39646390 ~ 39661664 (-)
LOC110503403 fam168a coding upstream 2812 40027973 ~ 40121905 (-)
LOC118944043 NA coding upstream 345049 40370130 ~ 40380480 (-)
LOC118944045 NA coding upstream 1337381 41362542 ~ 41375708 (-)
zbbx zbbx coding upstream 1751795 41776956 ~ 41865547 (-)
LOC118944009 LOC106613246 coding upstream 1963562 41988723 ~ 42023238 (-)
G1931448 NA non-coding downstream 9512 40013887 ~ 40014285 (-)
G1931438 NA non-coding downstream 50337 39972670 ~ 39973460 (-)
G1931424 NA non-coding downstream 76379 39947185 ~ 39947418 (-)
G1931423 NA non-coding downstream 77089 39946498 ~ 39946708 (-)
G1931422 NA non-coding downstream 77989 39945570 ~ 39945808 (-)
G1931259 NA non-coding upstream 774 40025935 ~ 40027349 (-)
G1931268 NA non-coding upstream 61339 40086500 ~ 40095208 (-)
G1931464 NA non-coding upstream 78821 40103982 ~ 40104783 (-)
G1931467 NA non-coding upstream 86184 40111345 ~ 40111664 (-)
G1931133 LOC106613217 other downstream 673158 39319414 ~ 39350639 (-)
dhx34 dhx34 other downstream 936794 39058690 ~ 39087005 (-)
G1930981 LOC106613377 other downstream 1043817 38976417 ~ 38982781 (-)
G1930910 NA other downstream 1237526 38785578 ~ 38786271 (-)
G1930873 NA other downstream 1286198 38736517 ~ 38737599 (-)
G1931785 NA other upstream 440459 40465620 ~ 40465867 (-)
G1932422 NA other upstream 1131210 41156371 ~ 41156733 (-)
G1933401 NA other upstream 2047966 42073127 ~ 42075939 (-)
G1933529 NA other upstream 2374736 42399897 ~ 42400327 (-)

Expression


Co-expression Network