LOC118944043


Basic Information

Item Value
gene id LOC118944043
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 40370130 ~ 40380480 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961568.1
atgttctTCATCACATTCAGCATCATGTTCATCATCATGTTCATCATCATGTTCATCATCATGTTCATCatgttcatcatcatcatgttcTTCATCACATTCAGCATCATGTTCATCATCATGTTCATCATCATGTTCATCATCATGTTCTTCATCACCATGTTCATCATGTTCATCATCATGTTCTTCATCACCATGTTCATcatgttcatcatcatcatcatcacattcATCATGTTCATCATCACGTTCATCATCACATTCATCATCatgttcatcatcatcatgttcTTCATCACGTTCATCATCATGTTCATCATGTTCATCATCATGTTCTTCATCACCATGTTCATcatgttcatcatcatcatcatcatcacattcATCATGTTCATCATCACGTTCATCATCACGTTCATCATcatgttcatcatcatcatcatgttctTCATCACGTTCATCATCACGTTCATCATCATGTTCATCATGTTCATCATCATGTTCTTCAtcacattcatcatcatcatgttcTTCATCACGTTCATCATCATGTTCATCATCAtgttcttcatcatcatcatcatcatgttcaTCATCATGTTCTTCATCGAGTTTTTCATCATGTTCTTCATCTTGTTCATCATCATGGTCAACATCatgttcatcatcatcatgttcATCATCATGTTCTTCATCATGTTCATCGTCATCATGTTCTTCATCATGTTCAGCATCATGTTCATCATCATGTTCATCATCGtgttcatcatcttcatcatgtTCATCCCATTCgcagcaatccCAACTTTTTTCGGGACCCTGAAGGACGTCAACCTCAACCGTAgccccagcacctcacacaggaTGCAACAGAGCAACAGATGccccgcccagaccagcgagacacgcTTCCAGACCTGCAAGACCCTCCTGAAGGACCTGCACTGA
>TU2209648
tgtccacctctacaaggcagcaatccCAACTTTTTTCGGGACCCTGAAGGACGTCAACCTCAACCGTAgccccagcacctcacacaggaTGCAACAGAGCAACAGATGccccgcccagaccagcgagacacgcTTCCAGACCTGCAAGACCCTCCTGAAGGACCTGCACTGAGAGAACCCAtgccaagaggacctacacccagaccacagcatcaCCAGCCACACCCAAACCAGCTGAGACCACCCCAAGCA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961568.1 False 948 mRNA 0.39 2 40370210 40380480
TU2209648 True 252 lncRNA 0.58 1 40370130 40370381

Neighbor

gene id symbol gene type direction distance location
LOC110503403 fam168a coding downstream 248305 40027973 ~ 40121905 (-)
LOC118944096 NA coding downstream 345049 40023797 ~ 40025161 (-)
LOC110503195 LOC106613241 coding downstream 368550 39984918 ~ 40001660 (-)
LOC110503477 LOC106613202 coding downstream 386776 39817311 ~ 39983434 (-)
LOC110503196 LOC106613240 coding downstream 389680 39873196 ~ 39980530 (-)
LOC118944045 NA coding upstream 982062 41362542 ~ 41375708 (-)
zbbx zbbx coding upstream 1396476 41776956 ~ 41865547 (-)
LOC118944009 LOC106613246 coding upstream 1608243 41988723 ~ 42023238 (-)
LOC110489558 LOC106613247 coding upstream 1710103 42090565 ~ 42170024 (-)
LOC110489559 LOC106613248 coding upstream 1731189 42111669 ~ 42121837 (-)
G1931709 NA non-coding downstream 450 40369520 ~ 40369760 (-)
G1931684 NA non-coding downstream 20942 40349018 ~ 40349268 (-)
G1931640 NA non-coding downstream 81044 40288760 ~ 40289166 (-)
G1931551 NA non-coding downstream 175680 40193586 ~ 40194530 (-)
G1931519 NA non-coding downstream 210290 40159718 ~ 40159920 (-)
G1931745 NA non-coding upstream 12924 40393404 ~ 40401418 (-)
G1931758 NA non-coding upstream 57733 40438213 ~ 40438461 (-)
G1931771 NA non-coding upstream 70585 40451065 ~ 40451456 (-)
G1931780 NA non-coding upstream 81278 40461758 ~ 40462169 (-)
G1931784 NA non-coding upstream 83309 40463789 ~ 40464201 (-)
G1931133 LOC106613217 other downstream 1019571 39319414 ~ 39350639 (-)
dhx34 dhx34 other downstream 1283207 39058690 ~ 39087005 (-)
G1930981 LOC106613377 other downstream 1390230 38976417 ~ 38982781 (-)
G1930910 NA other downstream 1583939 38785578 ~ 38786271 (-)
G1930873 NA other downstream 1632611 38736517 ~ 38737599 (-)
G1931785 NA other upstream 85140 40465620 ~ 40465867 (-)
G1932422 NA other upstream 775891 41156371 ~ 41156733 (-)
G1933401 NA other upstream 1692647 42073127 ~ 42075939 (-)
G1933529 NA other upstream 2019417 42399897 ~ 42400327 (-)

Expression


Co-expression Network