XLOC_037999 (ppp2r3b)


Basic Information

Item Value
gene id XLOC_037999
gene name ppp2r3b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 34484454 ~ 34509997 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074559
ttttttttttttggagaaaatcTTGTCTGCATGAAGAAAACCAGAAATGGCATCACCACAAACACTTCAACCTGTCCTGAAAATGAAGGTCGACGAGCTCTTCCTCTTTTGGTTGAGTGAGCCGAGTACTCAGGCGATGCTAAAAGACTACCTCAACAAAATCAAGAGTGGAGAAGAAATAGATCTAAGCCATGGTGAATTCAAGGGCACAAGCACTTTGATGTTCActgaaaacaacaataacaatatagcATCAAAGATTAATGCAACGGAGAGGATGAGTGCGGCCCTTGGTGCCCCGTGCAGTCCTCCTTCGGCCACGCTGCCATCTGCGACTGGCAGCAATAACAGGGCAGGAGTGAATGCGAGGGCCCTGCGACGCTCTGTCAGCACTAAAAAGCAGGCGCAGGCCAAGAAAGAGGAGCCCGTTACACCAGCCTTAAGTGAAAGCATTCCAAAGTTCTACTTCCCTCGAGGACAGCCTCAGGCCAACATCAACATAGACAATCTCATTTCCaagattgaaaaaatattttctcaatttccTGATGAAAGAGTCACTATTAAAGACATGGGGCTGGTCGCCAAGGCCTGCGATTGCCCATTCTATTGGAAAGCTCCATTGTTTCATGCTGCTGGAGGAGACAGGAGGGGATATGTGTCTGTTCACAAGTTTGTGGCAATGTGGAGAAAAGTGCTTCAGACCTGTCATGATGACGCATCCAAATTTCTTCACCTCCTGGCCAAGCCTGGCTGCAATTATTTGGAACAAGAAGACTTTATTCCATTCCTGCAGGATGTGGTGGATTCCCATACAGGCCTGGCGTTTTTAAAGGAGGCTTCAGACTTTCATTCACGCTACATTACCACTGTTGTCCAGAGAATATTTTACAATGTGAACCGCTCGTGGACTGGAAAAATAACATGTTCAGAACTCAGAAGAAGTACTTTTCTGCAGAATGTGGCACTTCTTGAAGAGGATGAAGAGATTAACCAGTTGACAGAGTTCTTCTCCTATGAACATTTCTATGTCATCTACTGTAAATTCTGGGAGCTGGATACAGATCACGACCTGTACATTGACCAGAGAGACCTAATGCGGCATAATGATCAAGCCATTTCCCACAGAATGATTGAGAGAATATTCTCGGGAGCTGTAACCAGGGGCCGAGCAGTTCATAAAGAGGGCAGGCTGAGCTACGGTGACTTTGTGTGGTTCCTCATATCTGAGGAGGACAAAAAGACTGAGACGAGCATAGAGTACTGGTTTCGCTGTATGGATCTGGATGGAGATGGAGTTCTTTCCATGTATGAGCTGCAGTACTTTTACCAGGAACAGTGTCAGAAACTTGAGGCCATGGCCATTGAACCATTGCCTTTCGAGGACTGCCTGTGCCAGATGTTAGATCTGGTTAAGCCAGAAAACCCagGAAAGATCACACTCAGGGACTTAAAGAGGTGCAGGATGTCCCATATTTTCTTCGACACGTTCTTCAACATTGAGAAGTATCTAGACCATGAACAGAGGGATCCCTTATTGGCTGCAAGGGATGCTGAGGCAGTGGGCCAGGAGATTTCGGACTGGGAGAGATATGCTGCAGAGGAGTATGACAACTTAGTGGCTGAAGAAACCGCAAATGAGCAATACCATGATGGGTACGACAATATTTTAGACCCGGCGGATCACGTGACGAGTGCATTAGAGCTGCACAGTGAGAAGAGACATCTGTTCGGGATCCCCAGCCCTCACTGCAACCTGGATCTGGATGAATATGAATACGAGGACGATTTCGAATGAGGAGCACACGAATAAATAAAGCATCATCTGGTAGTGTGTAGAACCCATCCTGCTCTCACACACCTGGTTCAGCTATCCCAGGCTAAAGAGCGATGCGGATGCACTCCTACAGGCCGCTGGATGCCGGACAGCAAACAGCAGCCAGAGACGGATTGTGCTGGTCCAGGTTTTCTGTCAGTCTGCGCACAACCAGCTTTCTAAAACCAAATGTAGCAGCAACTACACTGGAAGCcaaccacaacacttgaaatatTGATTCTGCACTAAACATTGAAGATTTTAATGCTGGTGAGACATTCCAGAAGATTGATGATTTCAGCTTGATGGCTTCTTTCTCCTGGAGCTTTGTccacatgctgtgtgtgtgtgtttgtgtttgagggTCACGCTAATATGAAGTAATGCAGTAATCAGACTCTGATGTTTTACTGTGTCTGTGTGAGAGGTTTATAAGttataatgtatttatgtatatttgtttatatattgtttGGGTCATGTCTATAGAAGTGCTTCCTAAAGTTGCTTTTATTGTAATAATGAACTTTTGTTTTTCAACTGTCTTATCGTTCAATAAAGtattaagacaaaaat
>TCONS_00074560
TTTCGCGTGTGTTCGCCACTCTCGCGATATAAACTTTTCCCGGTTACCTGAGGAGACGAGAGTTTGGTTCAAAGTGTACCCCTATTGgaatgaacaaaaacaaacaaaaatcttcTTTATAACTGCAGaaaatcTTGTCTGCATGAAGAAAACCAGAAATGGCATCACCACAAACACTTCAACCTGTCCTGAAAATGAAGGTCGACGAGCTCTTCCTCTTTTGGTTGAGTGAGCCGAGTACTCAGGCGATGCTAAAAGACTACCTCAACAAAATCAAGAGTGGAGAAGAAATAGATCTAAGCCATGGTGAATTCAAGGGCACAAGCACTTTGATGTTCActgaaaacaacaataacaatatagcATCAAAGATTAATGCAACGGAGAGGATGAGTGCGGCCCTTGGTGCCCCGTGCAGTCCTCCTTCGGCCACGCTGCCATCTGCGACTGGCAGCAATAACAGGGCAGGAGTGAATGCGAGGGCCCTGCGACGCTCTGTCAGCACTAAAAAGCAGGCGCAGGCCAAGAAAGAGGAGCCCGTTACACCAGCCTTAAGTGAAAGCATTCCAAAGTTCTACTTCCCTCGAGGACAGCCTCAGGCCAACATCAACATAGACAATCTCATTTCCaagattgaaaaaatattttctcaatttccTGATGAAAGAGTCACTATTAAAGACATGGGGCTGGTCGCCAAGGCCTGCGATTGCCCATTCTATTGGAAAGCTCCATTGTTTCATGCTGCTGGAGGAGACAGGAGGGGATATGTGTCTGTTCACAAGTTTGTGGCAATGTGGAGAAAAGTGCTTCAGACCTGTCATGATGACGCATCCAAATTTCTTCACCTCCTGGCCAAGCCTGGCTGCAATTATTTGGAACAAGAAGACTTTATTCCATTCCTGCAGGATGTGGTGGATTCCCATACAGGCCTGGCGTTTTTAAAGGAGGCTTCAGACTTTCATTCACGCTACATTACCACTGTTGTCCAGAGAATATTTTACAATGTGAACCGCTCGTGGACTGGAAAAATAACATGTTCAGAACTCAGAAGAAGTACTTTTCTGCAGAATGTGGCACTTCTTGAAGAGGATGAAGAGATTAACCAGTTGACAGAGTTCTTCTCCTATGAACATTTCTATGTCATCTACTGTAAATTCTGGGAGCTGGATACAGATCACGACCTGTACATTGACCAGAGAGACCTAATGCGGCATAATGATCAAGCCATTTCCCACAGAATGATTGAGAGAATATTCTCGGGAGCTGTAACCAGGGGCCGAGCAGTTCATAAAGAGGGCAGGCTGAGCTACGGTGACTTTGTGTGGTTCCTCATATCTGAGGAGGACAAAAAGACTGAGACGAGCATAGAGTACTGGTTTCGCTGTATGGATCTGGATGGAGATGGAGTTCTTTCCATGTATGAGCTGCAGTACTTTTACCAGGAACAGTGTCAGAAACTTGAGGCCATGGCCATTGAACCATTGCCTTTCGAGGACTGCCTGTGCCAGATGTTAGATCTGGTTAAGCCAGAAAACCCagGAAAGATCACACTCAGGGACTTAAAGAGGTGCAGGATGTCCCATATTTTCTTCGACACGTTCTTCAACATTGAGAAGTATCTAGACCATGAACAGAGGGATCCCTTATTGGCTGCAAGGGATGCTGAGGCAGTGGGCCAGGAGATTTCGGACTGGGAGAGATATGCTGCAGAGGAGTATGACAACTTAGTGGCTGAAGAAACCGCAAATGAGCAATACCATGATGGGTACGACAATATTTTAGACCCGGCGGATCACGTGACGAGTGCATTAGAGCTGCACAGTGAGAAGAGACATCTGTTCGGGATCCCCAGCCCTCACTGCAACCTGGATCTGGATGAATATGAATACGAGGACGATTTCGAATGA
>TCONS_00074561
ATCCTGACCCCAGAGTGCGTACTCTCTGCCACACTGGCTCCATTAGCAGACAGCAGCATGAGAATGAAGGAAATATCTTTACGGCAGGACCCTGACCTGAGGAAGGAGCTGGCACTGCTGGCGCGTGGCTGTGACTTTGTGCTACCCTCTCGCTTTAAGAAGAGGCTCAAAGCCTTCCAGCAAGGACAGCAGGCGCAGGCCAAGAAAGAGGAGCCCGTTACACCAGCCTTAAGTGAAAGCATTCCAAAGTTCTACTTCCCTCGAGGACAGCCTCAGGCCAACATCAACATAGACAATCTCATTTCCaagattgaaaaaatattttctcaatttccTGATGAAAGAGTCACTATTAAAGACATGGGGCTGGTCGCCAAGGCCTGCGATTGCCCATTCTATTGGAAAGCTCCATTGTTTCATGCTGCTGGAGGAGACAGGAGGGGATATGTGTCTGTTCACAAGTTTGTGGCAATGTGGAGAAAAGTGCTTCAGACCTGTCATGATGACGCATCCAAATTTCTTCACCTCCTGGCCAAGCCTGGCTGCAATTATTTGGAACAAGAAGACTTTATTCCATTCCTGCAGGATGTGGTGGATTCCCATACAGGCCTGGCGTTTTTAAAGGAGGCTTCAGACTTTCATTCACGCTACATTACCACTGTTGTCCAGAGAATATTTTACAATGTGAACCGCTCGTGGACTGGAAAAATAACATGTTCAGAACTCAGAAGAAGTACTTTTCTGCAGAATGTGGCACTTCTTGAAGAGGATGAAGAGATTAACCAGTTGACAGAGTTCTTCTCCTATGAACATTTCTATGTCATCTACTGTAAATTCTGGGAGCTGGATACAGATCACGACCTGTACATTGACCAGAGAGACCTAATGCGGCATAATGATCAAGCCATTTCCCACAGAATGATTGAGAGAATATTCTCGGGAGCTGTAACCAGGGGCCGAGCAGTTCATAAAGAGGGCAGGCTGAGCTACGGTGACTTTGTGTGGTTCCTCATATCTGAGGAGGACAAAAAGACTGAGACGAGCATAGAGTACTGGTTTCGCTGTATGGATCTGGATGGAGATGGAGTTCTTTCCATGTATGAGCTGCAGTACTTTTACCAGGAACAGTGTCAGAAACTTGAGGCCATGGCCATTGAACCATTGCCTTTCGAGGACTGCCTGTGCCAGATGTTAGATCTGGTTAAGCCAGAAAACCCagGAAAGATCACACTCAGGGACTTAAAGAGGTGCAGGATGTCCCATATTTTCTTCGACACGTTCTTCAACATTGAGAAGTATCTAGACCATGAACAGAGGGATCCCTTATTGGCTGCAAGGGATGCTGAGGCAGTGGGCCAGGAGATTTCGGACTGGGAGAGATATGCTGCAGAGGAGTATGACAACTTAGTGGCTGAAGAAACCGCAAATGAGCAATACCATGATGG
>TCONS_00074562
gtacgttTCACTTTTTGGTACTTTTGACGGTTGAAACAGCCATAAATGAACTTCAAATGGTTTCAGAcctttttgaatttattttagttCATCTTGATATTATTAAGGATGTCTGaatgtaaatacaaaatataatgatataatgaaGAATGTCGGAAATCCTAAGCTATTgccatccatagtagaaaaaaatttctaccggtttccaacattttttcaggggaaaaaagaaactcaaacaggtttaaaaccaGCTTGGAGAAAATGAacaccacattttttttattggtgtTCTGGTGTCTAGATGATTGAAAACCGCTGATTTACCTTTTGTGTTGTGTAATGATGAAAATGGTTGCCTGCAGAATGTGGCACTTCTTGAAGAGGATGAAGAGATTAACCAGTTGACAGAGTTCTTCTCCTATGAACATTTCTATGTCATCTACTGTAAATTCTGGGAGCTGGATACAGATCACGACCTGTACATTGACCAGAGAGACCTAATGCGGCATAATGATCAAGCCATTTCCCACAGAATGATTGAGAGAATATTCTCGGGAGCTGTAACCAGGGGCCGAGCAGTTCATAAAGAGGGCAGG

Function

symbol description
ppp2r3b Predicted to enable protein phosphatase regulator activity. Predicted to be involved in protein dephosphorylation. Predicted to be part of protein phosphatase type 2A complex. Orthologous to human PPP2R3B (protein phosphatase 2 regulatory subunit B''beta).

GO:

id name namespace
GO:0006470 protein dephosphorylation biological_process
GO:0000159 protein phosphatase type 2A complex cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0019888 protein phosphatase regulator activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-268 Predicted to enable protein phosphatase regulator activity. Predicted to be involved in protein dephosphorylation. Predicted to be part of protein phosphatase type 2A complex. Orthologous to human PPP2R3B (protein phosphatase 2 regulatory subunit B''beta).

Ensembl:

ensembl_id ENSDARG00000076004

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074559 False 2392 mRNA 0.45 13 34484454 34507680
TCONS_00074560 False 1910 mRNA 0.46 14 34485048 34509997
TCONS_00074561 False 1445 mRNA 0.47 12 34488163 34500197
TCONS_00074562 True 599 lncRNA 0.37 3 34491057 34492174

Neighbor

gene id symbol gene type direction distance location
XLOC_037998 grtp1b coding downstream 88190 34389976 ~ 34396264 (-)
XLOC_037997 cd247l coding downstream 115612 34356895 ~ 34368842 (-)
XLOC_037996 NA coding downstream 128904 34350517 ~ 34355550 (-)
XLOC_037995 BX294189.1 coding downstream 155952 34326430 ~ 34328502 (-)
XLOC_037994 gpa33b coding downstream 176341 34307140 ~ 34308113 (-)
XLOC_038000 NA coding upstream 36669 34546666 ~ 34587807 (-)
XLOC_038001 NA coding upstream 82029 34592026 ~ 34812883 (-)
XLOC_038002 BX601644.5 coding upstream 243047 34753044 ~ 34753159 (-)
XLOC_038003 BX601644.2 coding upstream 326071 34836068 ~ 34842414 (-)
XLOC_038004 BX601644.3 coding upstream 338863 34848860 ~ 34851804 (-)
XLOC_037988 NA non-coding downstream 401228 34069736 ~ 34083226 (-)
XLOC_037987 NA non-coding downstream 418848 34064509 ~ 34065606 (-)
XLOC_037986 NA non-coding downstream 541318 33942193 ~ 33943136 (-)
XLOC_038016 NA non-coding upstream 1170971 35680968 ~ 35832754 (-)

Expression


Co-expression Network