Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944083 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 43219074 ~ 43223984 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein EH28_23055, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036961868.1 | True | 540 | mRNA | 0.54 | 3 | 43219074 | 43223984 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| aplp2 | LOC102785027 | coding | downstream | 545291 | 42532534 ~ 42673783 (-) |
| LOC110503214 | LOC106581444 | coding | downstream | 848479 | 42358000 ~ 42370595 (-) |
| LOC110490901 | LOC106613249 | coding | downstream | 1003288 | 42190618 ~ 42215786 (-) |
| LOC110489559 | LOC106613248 | coding | downstream | 1097237 | 42111669 ~ 42121837 (-) |
| LOC110489558 | LOC106613247 | coding | downstream | 1108421 | 42090565 ~ 42170024 (-) |
| LOC110503290 | LOC106613395 | coding | upstream | 210142 | 43434126 ~ 43439279 (-) |
| LOC118944046 | NA | coding | upstream | 278317 | 43502301 ~ 43504650 (-) |
| LOC118944047 | NA | coding | upstream | 425422 | 43649406 ~ 43650309 (-) |
| LOC118944048 | NA | coding | upstream | 428809 | 43652793 ~ 43654707 (-) |
| LOC118943990 | nectin1 | coding | upstream | 1102804 | 44326788 ~ 44898432 (-) |
| G1934105 | NA | non-coding | downstream | 10951 | 43206085 ~ 43208123 (-) |
| G1934098 | NA | non-coding | downstream | 19867 | 43188727 ~ 43199207 (-) |
| G1934099 | NA | non-coding | downstream | 27624 | 43189042 ~ 43191450 (-) |
| G1934092 | NA | non-coding | downstream | 38300 | 43180360 ~ 43180774 (-) |
| G1934066 | NA | non-coding | downstream | 88648 | 43129235 ~ 43130426 (-) |
| G1934255 | NA | non-coding | upstream | 36602 | 43260586 ~ 43261019 (-) |
| G1934256 | NA | non-coding | upstream | 37122 | 43261106 ~ 43261776 (-) |
| G1934257 | NA | non-coding | upstream | 49947 | 43273931 ~ 43274240 (-) |
| G1934258 | NA | non-coding | upstream | 57720 | 43281704 ~ 43281912 (-) |
| G1934260 | NA | non-coding | upstream | 67516 | 43291500 ~ 43292181 (-) |
| G1934102 | NA | other | downstream | 19259 | 43199373 ~ 43199815 (-) |
| G1934061 | NA | other | downstream | 65107 | 43119965 ~ 43153967 (-) |
| G1933529 | NA | other | downstream | 818747 | 42399897 ~ 42400327 (-) |
| G1933401 | NA | other | downstream | 1143135 | 42073127 ~ 42075939 (-) |
| LOC118944009 | LOC106613246 | other | downstream | 1215646 | 41988723 ~ 42023238 (-) |
| G1935283 | NA | other | upstream | 1033312 | 44257296 ~ 44258661 (-) |
| G1935421 | NA | other | upstream | 1297171 | 44521155 ~ 44521439 (-) |
| G1935467 | NA | other | upstream | 1355038 | 44579022 ~ 44585392 (-) |
| G1935978 | NA | other | upstream | 2172048 | 45396032 ~ 45397761 (-) |
