XLOC_038006 (asmtl)


Basic Information

Item Value
gene id XLOC_038006
gene name asmtl
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 34872733 ~ 34882516 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074569
CTCTTCAGGGTCTCGGCAGTGGACAGCGTTTCGAAAAGCCCAGAGAGAGAAGTGGAACAAGCTTTTACAGGAAAGAGGTGGAAGTGACAGAATCATGCCGTTAAATCCAGTGATATCCAAGCTAAGTGGAAAGCTGGTTGTTCTGGCAAGCGCATCTCCACGACGCCTGGAGATTTTATCAAATGCTGGTTTACGATTTGAAGTTGTTCCCTCCTGGTTTAAAGAAACACTGGACAAGTCCTTGTTTAAGCACCCATGTGAATATGCAGTGGAGACAGCTAAACAGAAGGCTTTGGAGGTGGCTCAACGAATGCCATTTAAACACTTGAAAACTCCAGATATTGTTATCGGAGCGGACACTGTTGTGACTGTTGATGGCTTGATCTTGGAGAAGCCTACAGATAAACAAGATGCTTACCGTATGCTGTCCAGGTTGAGCGGGAAGGAACATAGTGTCTTTACAGGTGTAGCGATCGTGATCTGCCGTGACAAAAATAGTTCAGTAACAGATTACAAAGTGGTTGATTTTTACGAAGAGACAAAAGTGAAGTTTGCAGAATTATCTGAGGAGATGCTTTGGGAATATATCAACAGTGGAGAGCCCATGGACAAGGCCGGTGGTTATGGTATTCAAGCTTTGGGTGGCATGTTGGTGGAATATGTGCGAGGAGATTTTCTCAATGTAGTCGGCTTTCCTCTTAACCACTTCTGCAAGCAGTTGGGATCGATTTTCAATAGTCCACCTGCAAGTCCTGCCCACAAAATCAAACGGGACTGCGATGAAGCTTGGACTCTTGTTAACAAGACCACCAATGGGGATGTTGAGCTACTAGAAAATGTTAAAGATGACAGTTTGACATCTGTGCAAGAACAGAATGTAATGGGATTAGAGTTTGCCAAGTGCAACAGACAGGACGTCCCCCACAGCATCATCAGCTTGCTGGATGGGTTCAAAGTATCAAAGACTCTATTCACAGCATCCAAACTGAAGGTGTTCGATGTATTAAACACCCCTGGTGGTCTAACATTGGAAGAGGTAGCTGGCCAGATCAACGCTTCTCTTTTAGGCACTGAAAGGCTTCTGGAAGCCGCTGTCTCCTTAGGCCTACTAGAAAGGGTCAGACAGGAAGAGATCAGTGTGTACAGAAATACAGAACAGGCCAGTCGTTTCTTGGTAACGGACAGCCCAGTGTCTCTGCATGGATATATTCTCCACTGCAATGATATGGTGTGGCCTCTGTTCAGTCATCTAGAGAGCGCTGTAAGGGAGGGCACCAGCCAACATGAGCGGGCCTTTGGAAAGAAGAAAGAAGACGTGTTTCAGGATGTTTATTACAGTAAAGATGAAGTTAAGATACGGTTCATGGATGCAATGCACAGCATCGCAAGAGTGACTGGAAAAGATCTGGCAACCGCATTCGATCTCTCATGCTACAAAACAGCTTGTGATATCGGAGGTTGCACTGGTGCCATGGCATACGAGTTTACAAAAGCACACCCTGAGTTGTCAGTTACTATATTTGACTTGCCACAAGTCATCGAGATGAGACGTCATTTCCAGCCGAAAGAAAATGATGAAAGAGTGTCATTTGTTGCAGgaGATTTCTTTAAAGATGACCTACCTAAAGCAGACCTGTATATTCTTGCACGGGTCCTCCATGACTGGTCTGATGAGAAACTGCATGTGTTATTGAGTAAACTGTCTAAAATGTGGACACCAGGTTGTGGGCTCCTGGTTTCTGAGATCCTCCTGGACGAGGAGCGGAGAAGGCCGAGTCGAGCCCTGCTTCAGGCCCTCAGTATGACAGAAGGAAAGCAGAGGAGCACAGCAGAATATAGTGCCTTACTGGACAAGCACGGCTTCACTCTTAAACATGTCAAACACACGGACAACCTGCTGGATGCCATGCTATTTGTGAAAGAAGAACAGAATGACAAAAGAACATTATTAGGCTGTTCTTCAGCTTCCATTGAAACCGCAGAACTTGAGTAAAGTCATTTCTACAGCATCTGCATTGGAAACACTACAGCTGACTTCCATTGAGTGCAATAAATGTATtagctgtgtgtgttttttaaataatttgaatatttgtaGATGATCATTGCTAATTAATGTGTTCAACTGTTATAGAATGCATTAAATATGGTTTTGAATCAAATA
>TCONS_00074570
CCCAGTGTCTCTGCATGGATATATTCTCCACTGCAATGATATGGTGTGGCCTCTGTTCAGTCATCTAGAGAGCGCTGTAAGGGAGGGCACCAGCCAACATGAGCGGGCCTTTGGAAAGAAGAAAGAAGACGTGTTTCAGGTAAACACGATTTGATCACCCATGAATTCTTGAAGTTACTGACATTTTATTACTGAGTAATACTGTTTTGTTGATTTCTAGGATGTTTATTACAGTAAAGATGAAGTTAAGATACGGTTCATGGATGCAATGCACAGCATCGCAAGAGTGACTGGAAAAGATCTGGCAACCGCATTCGATCTCTCATGCTACAAAACAGCTTGTGATATCGGAGGTTGCACTGGTGCCATGGCATACGAGTTTACAAAAGCACACCCTGAGTTGTCAGTTACTATATTTGACTTGCCACAAGTCATCGAGATGAGACGTCATTTCCAGCCGAAAGAAAATGATGAAAGAGTGTCATTTGTTGCAGgaGATTTCTTTAAAGATGACCTACCTAAAGCAGACCTGTATATTCTTGCACGG

Function

symbol description
asmtl Predicted to enable nucleoside-triphosphate diphosphatase activity. Predicted to act upstream of or within methylation. Orthologous to human ASMTL (acetylserotonin O-methyltransferase like).

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0016740 transferase activity molecular_function
GO:0008168 methyltransferase activity molecular_function
GO:0008171 O-methyltransferase activity molecular_function
GO:0047429 nucleoside-triphosphate diphosphatase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-2854 Predicted to enable nucleoside-triphosphate diphosphatase activity. Predicted to act upstream of or within methylation. Orthologous to human ASMTL (acetylserotonin O-methyltransferase like).

Ensembl:

ensembl_id ENSDARG00000021433

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074569 False 2164 mRNA 0.44 14 34872733 34882516
TCONS_00074570 True 547 lncRNA 0.43 3 34874903 34877372

Neighbor

gene id symbol gene type direction distance location
XLOC_038005 slc25a6 coding downstream 833 34866576 ~ 34871900 (-)
XLOC_038004 BX601644.3 coding downstream 20929 34848860 ~ 34851804 (-)
XLOC_038003 BX601644.2 coding downstream 30319 34836068 ~ 34842414 (-)
XLOC_038001 NA coding downstream 59850 34592026 ~ 34812883 (-)
XLOC_038002 BX601644.5 coding downstream 119574 34753044 ~ 34753159 (-)
XLOC_038007 p2ry8 coding upstream 2417 34884933 ~ 34885902 (-)
XLOC_038008 upf3a coding upstream 20455 34902971 ~ 34915394 (-)
XLOC_038009 cdc16 coding upstream 37485 34920001 ~ 34937256 (-)
XLOC_038010 dcun1d2a coding upstream 55800 34938316 ~ 34945582 (-)
XLOC_038011 METTL21C coding upstream 87902 34970418 ~ 34974416 (-)
XLOC_038000 NA non-coding downstream 284926 34546666 ~ 34587807 (-)
XLOC_037996 NA non-coding downstream 517183 34350517 ~ 34355550 (-)
XLOC_038016 NA non-coding upstream 798452 35680968 ~ 35832754 (-)
XLOC_038017 CR759895.1 non-coding upstream 819139 35701655 ~ 35701772 (-)
XLOC_038019 NA non-coding upstream 1108148 35990664 ~ 35995392 (-)
XLOC_038020 BX005438.1 non-coding upstream 1236444 36118960 ~ 36120526 (-)
XLOC_038021 NA non-coding upstream 1517395 36399911 ~ 36413250 (-)

Expression


Co-expression Network