XLOC_038012 (si:ch211-160b11.4)


Basic Information

Item Value
gene id XLOC_038012
gene name si:ch211-160b11.4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 34978867 ~ 34986827 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074583
AGAAAGGAACACACTACAGACCTACAAGATCAGCACTGAAGGAACTCTGGATATTTTTTTCAAGATGAGGAAAATACTCTCGCTGGTTATCATCTTATCAGCAACAGTACATCTCACAGAAGCAGAAGAAGCTCCTCTGAAGCAGGATGAAGGTTTGCTGGAGCCTGATTCAGTCTTGCTGGAGCCTGAAACAACAGAggagcacaaacacacagaagagGCATCAGTGCTGTTGGAAGAACCAGAGCTAAATGCAGATTATCTGACTGAAGAAGCACCAGAGACAGAACTACAGGCAGAAACACTGCTGAACACTAACCTCGAACCTGTGGAGGAGCCTGTGAATGAACTTGTGGAGGAGCCCGTGGAGGAGCCTGTGGAGGAACCTGTGGAGGAACTGGTAGAGGAGCCTGTGGAGGAGCTTGTGGAGGAGCTTGTGGATGAACCTGTGGAGGAGCCTGTAGTGGAGCCTGTGGAGGAATCTGTGGAGAAGCCTGTGGTGGAGCCTGTGGTGGAGCCTGTGGAGGAACCTGTGGAATTCCAGTCTGAGGAGCCCACACTTCAAGCAGACTATATAGTGGTTGAAGAATCAGAAGTAGACATGAATCCTGGCAGAAAACAGCGAATGGCGTTACAAAAAGGTAGGCGCCGTTGTAGAGGATTCACCGTGCAGCACACATGTTACGAGTTCTTCACAAGAAAGCTCAATGCCAGTGATGCTGAGTTACAATGCCAAAAAGGCTGTCCTAATGGTCACCTGGCTTCCGTGACAAGCAGCTTTATTCGTGCTGAAATCTATAATCTAATGGACCGGTACAGCAGCCGCTCTGACACATGGCTTGGAGGAAGGAGAATCATTGGTACAAATACTTTTACATGGTTGGATGGAGAGCCGTGGACCTACAATGGCTTTTTTTCTGGAGAACCAAATAATCTGGGTGGAAATGAGGATTGCATTGAGATACTATATCGAGTGGGGTTCAATGACGTAGCGTGCTTTCTAACAAGACCGTTCGTCTGTTCCTGTCCAGTTTAGACAGCAAGAAGATTCACCTATcaaagtgtttctcaaccacattcctatgagaccaccagctctgcacatttccgtgtctccttaaccaaacacacctgattcagatcatcaactCATTAGCAAAGACCTAaacacctgtaatgggtgtgaccgACAAAAGAGACATCAAAAACATGTAGTGTTGGTAGTCCTcaagaaacgtggttgagaaacactgacctaACCCACTACACAGATACTTTTGTAAAGTGCAAAGTGTAACCATGGGTGAAATGCattgaatgtattaaaattaatattttataatacttcataagttattaaaactgattttattaaatttgccatggtttacattaaaaacaataatgaaaacatacattttatgAACAACAACTGATACATTAATCAGGTTAATACAGCATTGTATTGTTTTAAGTGTTTTTCTACTTAATAAAACCATCCTGTAC

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-081104-142 No description available

Ensembl:

ensembl_id ENSDARG00000076122

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074583 True 1506 mRNA 0.43 7 34978867 34986827

Neighbor

gene id symbol gene type direction distance location
XLOC_038011 METTL21C coding downstream 4451 34970418 ~ 34974416 (-)
XLOC_038010 dcun1d2a coding downstream 33285 34938316 ~ 34945582 (-)
XLOC_038009 cdc16 coding downstream 41611 34920001 ~ 34937256 (-)
XLOC_038008 upf3a coding downstream 63473 34902971 ~ 34915394 (-)
XLOC_038007 p2ry8 coding downstream 92965 34884933 ~ 34885902 (-)
XLOC_038013 appb coding upstream 39588 35026415 ~ 35161005 (-)
XLOC_038014 ncam2 coding upstream 183508 35170335 ~ 35557397 (-)
XLOC_038015 zp2l1 coding upstream 644613 35631440 ~ 35633827 (-)
XLOC_038016 NA coding upstream 694141 35680968 ~ 35832754 (-)
XLOC_038017 CR759895.1 coding upstream 714828 35701655 ~ 35701772 (-)
XLOC_038004 BX601644.3 non-coding downstream 127063 34848860 ~ 34851804 (-)
XLOC_038001 NA non-coding downstream 165984 34592026 ~ 34812883 (-)
XLOC_038002 BX601644.5 non-coding downstream 225708 34753044 ~ 34753159 (-)
XLOC_038000 NA non-coding downstream 391060 34546666 ~ 34587807 (-)
XLOC_037996 NA non-coding downstream 623317 34350517 ~ 34355550 (-)
XLOC_038019 NA non-coding upstream 1003837 35990664 ~ 35995392 (-)
XLOC_038020 BX005438.1 non-coding upstream 1132133 36118960 ~ 36120526 (-)
XLOC_038021 NA non-coding upstream 1413084 36399911 ~ 36413250 (-)

Expression


Co-expression Network