XLOC_038015 (zp2l1)


Basic Information

Item Value
gene id XLOC_038015
gene name zp2l1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 35631440 ~ 35633827 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074591
GAGAAGAACGGTGTCATGTCTTATCAAATCTGATGAGACCAGCTGCAACACCGCAGATCTTGATGGATCAGGGATGGGTGCTAATTGCTAATAAATGCAGAGGCGGAGGACACCTTCAAACACAGCTAATTATCAACCTTTAAAATAGCTGCTTGACAATCGGAAGTTATTGTGTtcagttttggaaaaaaaagatgGCAGCACTTTGGAGTTTAGTGCTACTTTGTATCACTAGTCGTTTATGTGCTGCAAATACTTCTTTACAAAGTAAAGAAGTGTTCCAATGGCCTGAACAACATCTGTTGGGTTTGGGTGTGAGAGAGCTTCCATCTCAAGCAGAACCTGTTCAGAAGTGTGATGTGCAAGATGAGGATAAGGTGCAGTGTGGAGAGCCTGGCATTTCTCCTGAAGACTGTAATGTTTTAAACTGCTGTTTTGATGGAAAACAGTGCTACTATGGCAATACAGTAACTGTCCAGTGTACAAGAGATGGGCAGTTTGTTGTTGTGGCCTTGAGAGATGCAACTATTCCAAGAATAAGCTTGGAGTCCATCAGCCTTTTGGGAGGAAGTGATCCTCCTTGTGCCCCCGTTGATGCCACTAAAGCTTTTGCCATCTACCAGTTCCCTGTCACTGCTTGTGGCACCACAGTGATGGTGGAAGATGACTTCCTAATCTATGAAAACAGAATGACATCTGTATATGAAGTAAATGTTGGACCTCTAGGCTCTATCACAAGAGATAGCCATTATGAGCTCCTCTTCCAGTGTAAATATTCACGCAGCAGTTTTGAAGCGCTGGTTGTTGAAGTCAACCctgttcctcctcctcttcctgtGGCTGCACTTGGACCTCTTAGAGTGGAGCTTAAACTGGCTAACGGGCAGTGTTTTCTTAAGGGATGTGTGGAAGAAGCTCAAGCATACTCTTCGTACTATGGTGATGCTGAGTATCCTGTGACTAAAGTCCTGCGGGAGCCAGTCTATGTTGAAGTTCATGTTCTCGAGAGGACTGACCCCAACATCTTTCTGACTTTGGGTCGTTGTTGGGCAACTTCAAACCCTGACCCTCAAAGCCTGCCCCAGTGGGATTTTATTGTAAATGGTTGTCCTTCCCAGGATGATCGTTACCTGACCACTTTGTTCCCTGTGGATGAGACTTCAGGCCTGCAGTTTCCAAACCACTTCAAACGGTTTGCAGTCAAGATGTTTACTTTTGTGGATCCTGCGTCTCTGGCCCCCCTGATGGAGACGGTCTTTATTCACTGCAGTACATCAGTTTGTACTCCAACTGCAGAAGACTCTTGTGTTCAGAGTTGCAACAGGAAGAGGAGAGATGTTGGTATACACAAGCGCCGTCGTACCCGCTCTGTAGTTTCCAGTGGAGAGATTCATCTTGTTCGACCCTGAGTTTCTTTTTTGTAATAAAGAGAGAGCAATTTTAAAGTCTTTTCTCTGAAAA
>TCONS_00074592
TGTGTtcagttttggaaaaaaaagatgGCAGCACTTTGGAGTTTAGTGCTACTTTGTATCACTAGTCGTTTATGTGCTGCAAATACTTCTTTACAAAGTAAAGAAGTGTTCCAATGGCCTGAACAACATCTGTTGGGTTTGGGTGTGAGAGAGCTTCCATCTCAAGCAGAACCTGTTCAGAAGTGTGATGTGCAAGATGAGGATAAGGTGCAGTGTGGAGAGCCTGGCATTTCTCCTGAAGACTGTAATGTTTTAAACTGCTGTTTTGATGGAAAACAGTGCTACTATGGCAATACAGTAACTGTCCAGTGTACAAGAGATGGGCAGTTTGTTGTTGTGGCCTTGAGAGATGCAACTATTCCAAGAATAAGCTTGGAGTCCATCAGCCTTTTGGGAGGAAGTGATCCTCCTTGTGCCCCCGTTGATGCCACTAAAGCTTTTGCCATCTACCAGTTCCCTGTCACTGCTTGTGGCACCACAGTGATGGTTGGTACTGACTGTGAGGTTTAGGTGGGCCTCATGTGCTttgttagtaattttttattttggtaacgTGCTACAGGTGGAAGATGACTTCCTAATCTATGAAAACAGAATGACATCTGTATATGAAGTAAATGTTGGACCTCTAGGCTCTATCACAAGAGATAGCCATTATGAGCTCCTCTTCCAGTGTAAATATTCACGCAGCAGTTTTGAAGCGCTGGTTGTTGAAGTCAACCctgttcctcctcctcttcctgtGGCTGCACTTGGACCTCTTAGAGTGGAGCTTAAACTGGCTAACGGGCAGTGTTTTCTTAAGGGATGTGTG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-060818-3 No description available

Ensembl:

ensembl_id ENSDARG00000055415

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074591 False 1461 mRNA 0.45 8 35631440 35633827
TCONS_00074592 True 814 lncRNA 0.44 3 35632293 35633657

Neighbor

gene id symbol gene type direction distance location
XLOC_038014 ncam2 coding downstream 74043 35170335 ~ 35557397 (-)
XLOC_038013 appb coding downstream 470435 35026415 ~ 35161005 (-)
XLOC_038012 si:ch211-160b11.4 coding downstream 644613 34978867 ~ 34986827 (-)
XLOC_038011 METTL21C coding downstream 657024 34970418 ~ 34974416 (-)
XLOC_038010 dcun1d2a coding downstream 685858 34938316 ~ 34945582 (-)
XLOC_038016 NA coding upstream 47141 35680968 ~ 35832754 (-)
XLOC_038017 CR759895.1 coding upstream 67828 35701655 ~ 35701772 (-)
XLOC_038018 dnajc28 coding upstream 238871 35872698 ~ 35875051 (-)
XLOC_038019 NA coding upstream 356837 35990664 ~ 35995392 (-)
XLOC_038020 BX005438.1 coding upstream 485133 36118960 ~ 36120526 (-)
XLOC_038004 BX601644.3 non-coding downstream 779636 34848860 ~ 34851804 (-)
XLOC_038001 NA non-coding downstream 818557 34592026 ~ 34812883 (-)
XLOC_038002 BX601644.5 non-coding downstream 878281 34753044 ~ 34753159 (-)
XLOC_038000 NA non-coding downstream 1043633 34546666 ~ 34587807 (-)
XLOC_037996 NA non-coding downstream 1275890 34350517 ~ 34355550 (-)
XLOC_038021 NA non-coding upstream 766084 36399911 ~ 36413250 (-)

Expression


Co-expression Network