XLOC_038016



Basic Information


Item Value
gene id XLOC_038016
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 35680968 ~ 35832754 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00075420
CTGCAGGTACACTAGCAACTCAATTTACAGAGAGGAGAAATAATGGCTTCGGGAGCACTGTTCTGAAGACACTACACCTTGTTGCCGGAGGGAACACATGCACGGGGTTGGATAATGATGACCAGATGAACCAGGGGAGATATGGTAGCCAGGCACACAGATAGACGAACTCTGGGACATTGACAACAAAAAGAGGAGGGACCAGGAGTAACCACACTAGGATGGAAAGACGCAGACACTGGAGAACATACGAGAGAGTTCGCTGGCgcacatggtgagctactggacaaactggtaacagcgggaaaccCATCCA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00075420 True 316 lncRNA 0.50 4 35680968 35832754

Neighbor


gene id symbol gene type direction distance location
XLOC_038015 zp2l1 coding downstream 47141 35631440 ~ 35633827 (-)
XLOC_038014 ncam2 coding downstream 123571 35170335 ~ 35557397 (-)
XLOC_038013 appb coding downstream 519963 35026415 ~ 35161005 (-)
XLOC_038012 si:ch211-160b11.4 coding downstream 694141 34978867 ~ 34986827 (-)
XLOC_038011 METTL21C coding downstream 706552 34970418 ~ 34974416 (-)
XLOC_038018 dnajc28 coding upstream 39944 35872698 ~ 35875051 (-)
XLOC_038019 NA coding upstream 157910 35990664 ~ 35995392 (-)
XLOC_038020 BX005438.1 coding upstream 286206 36118960 ~ 36120526 (-)
XLOC_038021 NA coding upstream 567157 36399911 ~ 36413250 (-)
XLOC_038022 NA coding upstream 912781 36745535 ~ 36746819 (-)
XLOC_038004 BX601644.3 non-coding downstream 829164 34848860 ~ 34851804 (-)
XLOC_038001 NA non-coding downstream 868085 34592026 ~ 34812883 (-)
XLOC_038002 BX601644.5 non-coding downstream 927809 34753044 ~ 34753159 (-)
XLOC_038000 NA non-coding downstream 1093161 34546666 ~ 34587807 (-)
XLOC_037996 NA non-coding downstream 1325418 34350517 ~ 34355550 (-)
XLOC_038023 CR932978.3 non-coding upstream 928135 36760889 ~ 36761294 (-)

Expression



Co-expression Network