XLOC_038019


Basic Information

Item Value
gene id XLOC_038019
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 35990664 ~ 35995392 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075005
cTCAACTAATCCCTTATGAAAACTGAGGGGCCAcgatttatttttccttttgccCTCAAATATGACACGTTTAATGACAATGATGACAAAATTCATATGTCGAAATGAACATGAAAAAAAAACACATCAACTGCTTGCTAGGTTGCTATCGAAAATCCAGCatgtaatgcacatttaaaataaggaatattatacacaaataattttaatacaaaTCTTTTCATTCCAAAAACTCAAATGACATGCATGCGTACGACACGAATGCACATtgaaaaaaacggaaaaaaacactttcacaatAAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075005 True 303 lncRNA 0.32 2 35990664 35995392

Neighbor

gene id symbol gene type direction distance location
XLOC_038018 dnajc28 coding downstream 115613 35872698 ~ 35875051 (-)
XLOC_038016 NA coding downstream 157910 35680968 ~ 35832754 (-)
XLOC_038017 CR759895.1 coding downstream 288892 35701655 ~ 35701772 (-)
XLOC_038015 zp2l1 coding downstream 356837 35631440 ~ 35633827 (-)
XLOC_038014 ncam2 coding downstream 433267 35170335 ~ 35557397 (-)
XLOC_038020 BX005438.1 coding upstream 123568 36118960 ~ 36120526 (-)
XLOC_038021 NA coding upstream 404519 36399911 ~ 36413250 (-)
XLOC_038022 NA coding upstream 750143 36745535 ~ 36746819 (-)
XLOC_038023 CR932978.3 coding upstream 765497 36760889 ~ 36761294 (-)
XLOC_038024 CR932978.2 coding upstream 770231 36765623 ~ 36766028 (-)
XLOC_038004 BX601644.3 non-coding downstream 1138860 34848860 ~ 34851804 (-)
XLOC_038001 NA non-coding downstream 1177781 34592026 ~ 34812883 (-)
XLOC_038002 BX601644.5 non-coding downstream 1237505 34753044 ~ 34753159 (-)

Expression


Co-expression Network