Gene
RNA
| Item | Value |
|---|---|
| gene id | G1892985 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 3227516 ~ 3235034 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cleft lip and palate transmembrane protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2165486 | True | 1118 | lncRNA | 0.44 | 3 | 3227516 | 3235034 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503563 | LOC106612495 | coding | downstream | 38842 | 3179587 ~ 3188674 (-) |
| LOC110503562 | LOC106612510 | coding | downstream | 47989 | 3177212 ~ 3179527 (-) |
| map3k10 | map3k10 | coding | downstream | 159410 | 3023415 ~ 3068106 (-) |
| LOC118944109 | NA | coding | downstream | 502481 | 2722947 ~ 2725035 (-) |
| gfm1 | gfm1 | coding | downstream | 528508 | 2686141 ~ 2699008 (-) |
| LOC110503509 | NA | coding | upstream | 43257 | 3278291 ~ 3281058 (-) |
| trnastop-uca | NA | coding | upstream | 46399 | 3281433 ~ 3281519 (-) |
| trnastop-uca-2 | NA | coding | upstream | 47042 | 3282076 ~ 3282162 (-) |
| trnastop-uca-3 | NA | coding | upstream | 57196 | 3234183 ~ 3292316 (-) |
| LOC110503508 | LOC106612386 | coding | upstream | 60660 | 3295694 ~ 3300801 (-) |
| G1892984 | NA | non-coding | downstream | 28212 | 3199070 ~ 3199304 (-) |
| G1892980 | NA | non-coding | downstream | 30959 | 3196329 ~ 3196557 (-) |
| G1892973 | NA | non-coding | downstream | 44143 | 3183113 ~ 3183373 (-) |
| G1892970 | NA | non-coding | downstream | 53554 | 3170898 ~ 3173962 (-) |
| G1893104 | NA | non-coding | upstream | 198632 | 3433666 ~ 3433881 (-) |
| G1893105 | NA | non-coding | upstream | 201895 | 3436929 ~ 3437152 (-) |
| G1893116 | NA | non-coding | upstream | 210774 | 3445808 ~ 3446048 (-) |
| G1893122 | NA | non-coding | upstream | 216103 | 3451137 ~ 3451356 (-) |
| G1893167 | NA | non-coding | upstream | 221005 | 3456039 ~ 3510646 (-) |
| G1892888 | NA | other | downstream | 208075 | 3013455 ~ 3019441 (-) |
| G1892841 | NA | other | downstream | 290465 | 2936184 ~ 2937051 (-) |
| G1891499 | NA | other | downstream | 1422454 | 1802008 ~ 1805430 (-) |
| LOC110503527 | med29 | other | downstream | 2136526 | 1087227 ~ 1091024 (-) |
| G1889857 | NA | other | downstream | 2668417 | 557130 ~ 559099 (-) |
| G1893790 | LOC106612372 | other | upstream | 675675 | 3881288 ~ 3914848 (-) |
| egln2 | egln2 | other | upstream | 818801 | 4053778 ~ 4075685 (-) |
| si:dkey-202l22.3 | LOC106612399 | other | upstream | 1056815 | 4289886 ~ 4294714 (-) |
| G1894611 | NA | other | upstream | 1118544 | 4353578 ~ 4353936 (-) |
| G1896030 | NA | other | upstream | 2633862 | 5868896 ~ 5869218 (-) |
