XLOC_038021


Basic Information

Item Value
gene id XLOC_038021
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 36399911 ~ 36413250 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075421
CCCAAACAGAGGAGGCCGTTCGCTTCTCAGCAGACTGACTTCAGCAGAGAGCAGATCCAGCTGGAAGATGGAGGCGTTCATGTACTCCGTCCAGAAGATGGAATTCTGGTACTGCGCAATCCCAAACGGtaccTGTTGAGAGGATCCACCACTATGGCTCTGGGATGAGACATGTCTCCCTCGAGAAGAGTCTTCCTGGTTTCAGATGCCCGCTCCAGCCTGGCCACGCTGATGGTTTTTCTGTAGCCATCATTGGTCCAGTACAAATTATTCCCAATCCAATCCACAGAAATCCCCTCTACATTA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075421 True 306 lncRNA 0.51 2 36399911 36413250

Neighbor

gene id symbol gene type direction distance location
XLOC_038020 BX005438.1 coding downstream 279385 36118960 ~ 36120526 (-)
XLOC_038019 NA coding downstream 404519 35990664 ~ 35995392 (-)
XLOC_038018 dnajc28 coding downstream 524860 35872698 ~ 35875051 (-)
XLOC_038016 NA coding downstream 567157 35680968 ~ 35832754 (-)
XLOC_038017 CR759895.1 coding downstream 698139 35701655 ~ 35701772 (-)
XLOC_038022 NA coding upstream 332285 36745535 ~ 36746819 (-)
XLOC_038023 CR932978.3 coding upstream 347639 36760889 ~ 36761294 (-)
XLOC_038024 CR932978.2 coding upstream 352373 36765623 ~ 36766028 (-)
XLOC_038025 CR932978.1 coding upstream 357107 36770357 ~ 36770663 (-)
XLOC_038026 BX664716.1 coding upstream 369297 36782547 ~ 36782665 (-)
XLOC_038004 BX601644.3 non-coding downstream 1548107 34848860 ~ 34851804 (-)

Expression


Co-expression Network