Gene
RNA
| Item | Value |
|---|---|
| gene id | G1893762 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 3823966 ~ 3824179 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2166345 | True | 214 | lncRNA | 0.46 | 1 | 3823966 | 3824179 |
3,822,400
3,822,800
3,823,200
3,823,600
3,824,000
3,824,400
3,824,400
3,824,800
3,825,200
3,825,600
3,826,000
3,826,400
NC_048588.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503499 | ap2s1 | coding | downstream | 12938 | 3805042 ~ 3811028 (-) |
| LOC110503502 | LOC106612376 | coding | downstream | 136548 | 3676671 ~ 3687418 (-) |
| LOC110503301 | ptgir | coding | downstream | 181481 | 3599139 ~ 3642485 (-) |
| LOC110503506 | gemin7 | coding | downstream | 391140 | 3430127 ~ 3432826 (-) |
| LOC110503302 | LOC106612383 | coding | downstream | 411822 | 3399735 ~ 3412144 (-) |
| LOC118944023 | tmem160 | coding | upstream | 208735 | 4032914 ~ 4037053 (-) |
| egln2 | egln2 | coding | upstream | 229599 | 4053778 ~ 4075685 (-) |
| LOC110503493 | LOC107566082 | coding | upstream | 349841 | 4174020 ~ 4176885 (-) |
| si:dkey-202l22.3 | LOC106612399 | coding | upstream | 465707 | 4289886 ~ 4294714 (-) |
| LOC118944008 | NA | coding | upstream | 479832 | 4304011 ~ 4304884 (-) |
| G1893761 | NA | non-coding | downstream | 549 | 3823006 ~ 3823417 (-) |
| G1893758 | NA | non-coding | downstream | 4254 | 3818872 ~ 3819712 (-) |
| G1893748 | LOC106612374 | non-coding | downstream | 24709 | 3790382 ~ 3799257 (-) |
| G1893719 | NA | non-coding | downstream | 80108 | 3743655 ~ 3743858 (-) |
| G1893718 | NA | non-coding | downstream | 83165 | 3740499 ~ 3740801 (-) |
| G1893763 | NA | non-coding | upstream | 119 | 3824298 ~ 3824676 (-) |
| G1893764 | NA | non-coding | upstream | 643 | 3824822 ~ 3825036 (-) |
| G1893765 | NA | non-coding | upstream | 1349 | 3825528 ~ 3826077 (-) |
| G1893766 | NA | non-coding | upstream | 2731 | 3826910 ~ 3827141 (-) |
| G1893767 | NA | non-coding | upstream | 2997 | 3827176 ~ 3827465 (-) |
| G1892888 | NA | other | downstream | 804525 | 3013455 ~ 3019441 (-) |
| G1892841 | NA | other | downstream | 886915 | 2936184 ~ 2937051 (-) |
| G1891499 | NA | other | downstream | 2018904 | 1802008 ~ 1805430 (-) |
| LOC110503527 | med29 | other | downstream | 2732976 | 1087227 ~ 1091024 (-) |
| G1889857 | NA | other | downstream | 3264867 | 557130 ~ 559099 (-) |
| G1893790 | LOC106612372 | other | upstream | 86530 | 3881288 ~ 3914848 (-) |
| G1894611 | NA | other | upstream | 529399 | 4353578 ~ 4353936 (-) |
| G1896030 | NA | other | upstream | 2044717 | 5868896 ~ 5869218 (-) |
