Gene
RNA
| Item | Value |
|---|---|
| gene id | G1893604 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 4289908 ~ 4290598 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2166174 | True | 691 | TUCP | 0.50 | 1 | 4289908 | 4290598 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503491 | LOC106612400 | coding | upstream | 11754 | 4267530 ~ 4278154 (+) |
| LOC110503492 | prkd2 | coding | upstream | 28397 | 4200946 ~ 4261511 (+) |
| LOC110503494 | strn4 | coding | upstream | 93375 | 4176229 ~ 4196533 (+) |
| LOC110503495 | slc1a5 | coding | upstream | 119559 | 4158455 ~ 4170349 (+) |
| LOC110503300 | npas1 | coding | upstream | 260789 | 3985861 ~ 4029119 (+) |
| LOC118944093 | NA | coding | downstream | 46004 | 4336602 ~ 4341404 (+) |
| il10r1 | il10r1 | coding | downstream | 432041 | 4722639 ~ 4726930 (+) |
| tmprss4a | LOC106612727 | coding | downstream | 453035 | 4743633 ~ 4762831 (+) |
| LOC118944078 | NA | coding | downstream | 1093860 | 5384458 ~ 5387799 (+) |
| LOC118944106 | NA | coding | downstream | 1140861 | 5431459 ~ 5448034 (+) |
| G1893581 | NA | non-coding | upstream | 46236 | 4243438 ~ 4243672 (+) |
| G1893580 | NA | non-coding | upstream | 46515 | 4243171 ~ 4243393 (+) |
| G1893578 | NA | non-coding | upstream | 49427 | 4240275 ~ 4240481 (+) |
| G1893577 | NA | non-coding | upstream | 49882 | 4239820 ~ 4240026 (+) |
| G1893575 | NA | non-coding | upstream | 53817 | 4235858 ~ 4236091 (+) |
| G1893613 | NA | non-coding | downstream | 19971 | 4310569 ~ 4329084 (+) |
| G1893624 | NA | non-coding | downstream | 39465 | 4330063 ~ 4330430 (+) |
| G1894030 | NA | non-coding | downstream | 43214 | 4333812 ~ 4334173 (+) |
| G1894038 | NA | non-coding | downstream | 54265 | 4344863 ~ 4346369 (+) |
| G1892702 | NA | other | upstream | 987318 | 3270196 ~ 3302590 (+) |
| sipa1l3 | sipa1l3 | other | upstream | 1156185 | 3075396 ~ 3173993 (+) |
| fosb | fosb | other | upstream | 1328848 | 2951862 ~ 2961060 (+) |
| LOC110503556 | clasrp | other | upstream | 1469490 | 2803171 ~ 2820422 (+) |
| spa17 | spa17 | other | upstream | 2654892 | 1611442 ~ 1635016 (+) |
| G1894083 | LOC106612398 | other | downstream | 154025 | 4444623 ~ 4444976 (+) |
| bl1s3 | bl1s3 | other | downstream | 1228423 | 5518991 ~ 5520163 (+) |
| G1895266 | LOC106612719 | other | downstream | 1230817 | 5521415 ~ 5522865 (+) |
| G1896894 | NA | other | downstream | 2649818 | 6940416 ~ 6941556 (+) |
