Gene
RNA
| Item | Value |
|---|---|
| gene id | G1895337 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 5381864 ~ 5382102 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2168087 | True | 239 | lncRNA | 0.31 | 1 | 5381864 | 5382102 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503574 | LOC106612724 | coding | downstream | 278317 | 4981737 ~ 5103547 (-) |
| LOC118944070 | NA | coding | downstream | 551077 | 4828149 ~ 4830787 (-) |
| LOC110503573 | LOC106612743 | coding | downstream | 555405 | 4824197 ~ 4826459 (-) |
| LOC110503572 | scn2b | coding | downstream | 561803 | 4797194 ~ 4820066 (-) |
| LOC110503570 | scn4b | coding | downstream | 593176 | 4763066 ~ 4788688 (-) |
| LOC110503577 | LOC106612723 | coding | upstream | 108733 | 5490835 ~ 5494430 (-) |
| LOC110503578 | NA | coding | upstream | 124823 | 5503177 ~ 5510392 (-) |
| LOC110503446 | LOC106605018 | coding | upstream | 128947 | 5511049 ~ 5512037 (-) |
| LOC110503580 | LOC106612720 | coding | upstream | 132628 | 5514730 ~ 5518772 (-) |
| LOC110503579 | LOC106612719 | coding | upstream | 138339 | 5520441 ~ 5525760 (-) |
| G1895336 | NA | non-coding | downstream | 389 | 5381219 ~ 5381475 (-) |
| G1895335 | NA | non-coding | downstream | 6413 | 5375240 ~ 5375451 (-) |
| G1895331 | NA | non-coding | downstream | 13296 | 5368356 ~ 5368568 (-) |
| G1895108 | NA | non-coding | downstream | 52379 | 5283189 ~ 5329485 (-) |
| G1894923 | NA | non-coding | downstream | 259746 | 5013282 ~ 5122118 (-) |
| G1895353 | NA | non-coding | upstream | 21746 | 5403848 ~ 5404077 (-) |
| G1895365 | NA | non-coding | upstream | 36953 | 5419055 ~ 5419286 (-) |
| G1895377 | NA | non-coding | upstream | 43131 | 5425233 ~ 5425534 (-) |
| G1895380 | NA | non-coding | upstream | 45195 | 5427297 ~ 5427576 (-) |
| G1895409 | NA | non-coding | upstream | 77578 | 5459680 ~ 5459880 (-) |
| G1894611 | NA | other | downstream | 1027928 | 4353578 ~ 4353936 (-) |
| si:dkey-202l22.3 | LOC106612399 | other | downstream | 1087386 | 4289886 ~ 4294714 (-) |
| egln2 | egln2 | other | downstream | 1306289 | 4053778 ~ 4075685 (-) |
| G1893790 | LOC106612372 | other | downstream | 1467016 | 3881288 ~ 3914848 (-) |
| G1892888 | NA | other | downstream | 2362423 | 3013455 ~ 3019441 (-) |
| G1896030 | NA | other | upstream | 486794 | 5868896 ~ 5869218 (-) |
| LOC118944082 | NA | other | upstream | 800310 | 6181377 ~ 6231808 (-) |
| LOC110503590 | LOC106612705 | other | upstream | 1076419 | 6371958 ~ 6472758 (-) |
| G1899875 | NA | other | upstream | 2664677 | 8046779 ~ 8047974 (-) |
| LOC110503680 | LOC106612628 | other | upstream | 4188769 | 9570867 ~ 9579939 (-) |
