G1895213


Basic Information

Item Value
gene id G1895213
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 5419766 ~ 5420427 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2167958
gaaatacagtgtatacgttgttaatgttgtaaatgactattgtaactggaaatgtcagatttgtaaaggaatatctatataggcgcacggaggcccattatcagcaaccatcactcctgtgttccaatggcacgttgtgttagctaatcaaagtttatcatttgaaaaggctaattgatcattagaaaacccttttgctattatgttagcacagctgaaaactgttgttctgattaaagaagcaataaaactggccttctttagactagttgagtatctggaacatcagcatttgtgggttcgattacaggctcaaaatggccagaaacaaagaactttcttctgaaactcgtcagtctattcttgttctaagaaattagggctattccatgtgagaaattgccaagaaactgaagatctcgtacaacgctgtgtactactcccttcacagcaCAGCCCATactagctctaaccagaatagaaataggAGTGGGAAGCCCCAGTGCACAaccgagcaagaggacaagtacattagagtgtctagttagagaaacagatgcctcacaagttctcaactggcagcttcattaataaatagtacccgcaaaacaccagtctcaacgtaaagagtgaagaggcgactctgggatgctggccttcta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2167958 True 662 lncRNA 0.40 1 5419766 5420427
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118944078 NA coding upstream 31967 5384458 ~ 5387799 (+)
tmprss4a LOC106612727 coding upstream 656935 4743633 ~ 4762831 (+)
il10r1 il10r1 coding upstream 692836 4722639 ~ 4726930 (+)
LOC118944093 NA coding upstream 1079242 4336602 ~ 4341404 (+)
LOC110503491 LOC106612400 coding upstream 1141612 4267530 ~ 4278154 (+)
LOC118944106 NA coding downstream 11032 5431459 ~ 5448034 (+)
zgc:162730 tisb coding downstream 35334 5455761 ~ 5458351 (+)
bl1s3 bl1s3 coding downstream 98564 5518991 ~ 5520163 (+)
LOC110503581 LOC106612717 coding downstream 454058 5874485 ~ 6033122 (+)
LOC110503583 LOC106612716 coding downstream 653160 6073587 ~ 6076625 (+)
G1895204 NA non-coding upstream 10774 5408768 ~ 5408992 (+)
G1895197 NA non-coding upstream 20061 5399484 ~ 5399705 (+)
G1895196 NA non-coding upstream 21114 5398435 ~ 5398652 (+)
G1895178 NA non-coding upstream 45510 5374020 ~ 5374256 (+)
G1894541 NA non-coding upstream 159248 5259831 ~ 5260518 (+)
G1895226 NA non-coding downstream 28538 5448965 ~ 5449202 (+)
G1895268 NA non-coding downstream 104428 5524855 ~ 5525161 (+)
G1895270 NA non-coding downstream 106454 5526881 ~ 5527106 (+)
G1895292 NA non-coding downstream 140867 5561294 ~ 5561579 (+)
G1895294 NA non-coding downstream 141759 5562186 ~ 5562508 (+)
G1894083 LOC106612398 other upstream 974790 4444623 ~ 4444976 (+)
G1893604 NA other upstream 1129168 4289908 ~ 4290598 (+)
G1892702 NA other upstream 2117176 3270196 ~ 3302590 (+)
sipa1l3 sipa1l3 other upstream 2286043 3075396 ~ 3173993 (+)
G1895266 LOC106612719 other downstream 100988 5521415 ~ 5522865 (+)
G1896894 NA other downstream 1519989 6940416 ~ 6941556 (+)
G1896931 NA other downstream 1597368 7017795 ~ 7018558 (+)
LOC110503629 LOC106612674 other downstream 1896525 7316925 ~ 7350759 (+)

Expression

G1895213 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 20.
End of interactive chart.

G1895213 Expression in each Bioproject

Bar chart with 21 bars.
G1895213 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
End of interactive chart.

Co-expression Network