Gene
RNA
| Item | Value |
|---|---|
| gene id | G1895380 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 5427297 ~ 5427576 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2168147 | True | 280 | lncRNA | 0.40 | 1 | 5427297 | 5427576 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503574 | LOC106612724 | coding | downstream | 323750 | 4981737 ~ 5103547 (-) |
| LOC118944070 | NA | coding | downstream | 596510 | 4828149 ~ 4830787 (-) |
| LOC110503573 | LOC106612743 | coding | downstream | 600838 | 4824197 ~ 4826459 (-) |
| LOC110503572 | scn2b | coding | downstream | 607236 | 4797194 ~ 4820066 (-) |
| LOC110503570 | scn4b | coding | downstream | 638609 | 4763066 ~ 4788688 (-) |
| LOC110503577 | LOC106612723 | coding | upstream | 63259 | 5490835 ~ 5494430 (-) |
| LOC110503578 | NA | coding | upstream | 79349 | 5503177 ~ 5510392 (-) |
| LOC110503446 | LOC106605018 | coding | upstream | 83473 | 5511049 ~ 5512037 (-) |
| LOC110503580 | LOC106612720 | coding | upstream | 87154 | 5514730 ~ 5518772 (-) |
| LOC110503579 | LOC106612719 | coding | upstream | 92865 | 5520441 ~ 5525760 (-) |
| G1895377 | NA | non-coding | downstream | 1763 | 5425233 ~ 5425534 (-) |
| G1895365 | NA | non-coding | downstream | 8011 | 5419055 ~ 5419286 (-) |
| G1895353 | NA | non-coding | downstream | 23220 | 5403848 ~ 5404077 (-) |
| G1895337 | NA | non-coding | downstream | 45195 | 5381864 ~ 5382102 (-) |
| G1895336 | NA | non-coding | downstream | 45822 | 5381219 ~ 5381475 (-) |
| G1895409 | NA | non-coding | upstream | 32104 | 5459680 ~ 5459880 (-) |
| G1895411 | NA | non-coding | upstream | 32895 | 5460471 ~ 5460729 (-) |
| G1895415 | NA | non-coding | upstream | 38379 | 5465955 ~ 5466292 (-) |
| G1895416 | NA | non-coding | upstream | 39202 | 5466778 ~ 5466995 (-) |
| G1894611 | NA | other | downstream | 1073361 | 4353578 ~ 4353936 (-) |
| si:dkey-202l22.3 | LOC106612399 | other | downstream | 1132819 | 4289886 ~ 4294714 (-) |
| egln2 | egln2 | other | downstream | 1351722 | 4053778 ~ 4075685 (-) |
| G1893790 | LOC106612372 | other | downstream | 1512449 | 3881288 ~ 3914848 (-) |
| G1892888 | NA | other | downstream | 2407856 | 3013455 ~ 3019441 (-) |
| G1896030 | NA | other | upstream | 441320 | 5868896 ~ 5869218 (-) |
| LOC118944082 | NA | other | upstream | 754836 | 6181377 ~ 6231808 (-) |
| LOC110503590 | LOC106612705 | other | upstream | 1030945 | 6371958 ~ 6472758 (-) |
| G1899875 | NA | other | upstream | 2619203 | 8046779 ~ 8047974 (-) |
| LOC110503680 | LOC106612628 | other | upstream | 4143295 | 9570867 ~ 9579939 (-) |
