G1895526


Basic Information

Item Value
gene id G1895526
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 5632278 ~ 5632826 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2168299
ctttagtagtggtttctttgcagcaattcgaccatggagGGCTGATTCATGtactctcctctgaacagttgatgttgagatgtgtctgttacttgaactctgtgaagcatttatttgggctggtgactctaatgaacttatcctctgcagcagagttaacgctcggtcttccattcttgtggtggtcctcatgagagccaagatcatcatggcgcttgatggtttttgtgactgcacttgaagaaactgacAAAATgattgacattttccagattgactgaccttcatgtcttaaagtaaggatggactgtcatttttctttgcttattcgagctgttcttgacataacatggacttggtctttcaccaaatagggctatcttctgtatgccactcctaccttgtcacaacactactggattggctcaaacacattaagaaaataaattccacaaattaacttttaacgcattccaggtgactatctcatgaagctggttgagagaatgccaagagtgtgcaaagctgtttcaaggcaaagggtagcta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2168299 True 549 lncRNA 0.42 1 5632278 5632826
Loading

Neighbor

gene id symbol gene type direction distance location
bl1s3 bl1s3 coding upstream 112115 5518991 ~ 5520163 (+)
zgc:162730 tisb coding upstream 173927 5455761 ~ 5458351 (+)
LOC118944106 NA coding upstream 184244 5431459 ~ 5448034 (+)
LOC118944078 NA coding upstream 244479 5384458 ~ 5387799 (+)
tmprss4a LOC106612727 coding upstream 869447 4743633 ~ 4762831 (+)
LOC110503581 LOC106612717 coding downstream 241659 5874485 ~ 6033122 (+)
LOC110503583 LOC106612716 coding downstream 440761 6073587 ~ 6076625 (+)
LOC110503584 NA coding downstream 509577 6142403 ~ 6143853 (+)
LOC118944026 NA coding downstream 524014 6156840 ~ 6169793 (+)
LOC110503587 LOC106612711 coding downstream 652892 6285718 ~ 6356497 (+)
G1895294 NA non-coding upstream 69770 5562186 ~ 5562508 (+)
G1895292 NA non-coding upstream 70699 5561294 ~ 5561579 (+)
G1895270 NA non-coding upstream 105172 5526881 ~ 5527106 (+)
G1895268 NA non-coding upstream 107117 5524855 ~ 5525161 (+)
G1895226 NA non-coding upstream 183076 5448965 ~ 5449202 (+)
G1895564 NA non-coding downstream 28482 5661308 ~ 5661530 (+)
G1895566 NA non-coding downstream 28928 5661754 ~ 5662110 (+)
G1895574 NA non-coding downstream 39072 5671898 ~ 5672230 (+)
G1895610 NA non-coding downstream 65492 5698318 ~ 5698527 (+)
G1895618 NA non-coding downstream 69418 5702244 ~ 5702482 (+)
G1895266 LOC106612719 other upstream 109413 5521415 ~ 5522865 (+)
G1894083 LOC106612398 other upstream 1187302 4444623 ~ 4444976 (+)
LOC118944093 NA other upstream 1290874 4336602 ~ 4341404 (+)
G1893604 NA other upstream 1341680 4289908 ~ 4290598 (+)
G1896894 NA other downstream 1307590 6940416 ~ 6941556 (+)
G1896931 NA other downstream 1384969 7017795 ~ 7018558 (+)
LOC110503629 LOC106612674 other downstream 1684126 7316925 ~ 7350759 (+)
LOC118944073 LOC106612646 other downstream 2443380 8076117 ~ 8080686 (+)
G1898300 NA other downstream 3724225 9357051 ~ 9359164 (+)

Expression

G1895526 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
End of interactive chart.

G1895526 Expression in each Bioproject

Bar chart with 15 bars.
G1895526 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 125.
End of interactive chart.

Co-expression Network