G1895664


Basic Information

Item Value
gene id G1895664
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 5733632 ~ 5733862 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2168437
caactggtgttggttaaagccggtgtctgatgatttaaaaatgttttgtaattctatgaatcttacccagttgattaactcacccactctcccaaatcttaaatgcccagataaatctaccctgattgatttgatattgcCAAATtttccacatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagat

Function

NR:

description
PREDICTED: uncharacterized protein LOC109204916

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2168437 True 231 lncRNA 0.39 1 5733632 5733862

Neighbor

gene id symbol gene type direction distance location
bl1s3 bl1s3 coding upstream 213469 5518991 ~ 5520163 (+)
zgc:162730 tisb coding upstream 275281 5455761 ~ 5458351 (+)
LOC118944106 NA coding upstream 285598 5431459 ~ 5448034 (+)
LOC118944078 NA coding upstream 345833 5384458 ~ 5387799 (+)
tmprss4a LOC106612727 coding upstream 970801 4743633 ~ 4762831 (+)
LOC110503581 LOC106612717 coding downstream 140623 5874485 ~ 6033122 (+)
LOC110503583 LOC106612716 coding downstream 339725 6073587 ~ 6076625 (+)
LOC110503584 NA coding downstream 408541 6142403 ~ 6143853 (+)
LOC118944026 NA coding downstream 422978 6156840 ~ 6169793 (+)
LOC110503587 LOC106612711 coding downstream 551856 6285718 ~ 6356497 (+)
G1895635 NA non-coding upstream 18067 5715363 ~ 5715565 (+)
G1895624 NA non-coding upstream 24384 5707646 ~ 5709248 (+)
G1895618 NA non-coding upstream 31150 5702244 ~ 5702482 (+)
G1895610 NA non-coding upstream 35105 5698318 ~ 5698527 (+)
G1895574 NA non-coding upstream 61402 5671898 ~ 5672230 (+)
G1895749 NA non-coding downstream 48106 5781968 ~ 5782176 (+)
G1895806 NA non-coding downstream 89776 5823638 ~ 5823845 (+)
G1895853 NA non-coding downstream 135853 5869715 ~ 5943738 (+)
G1895996 NA non-coding downstream 322782 6056644 ~ 6057537 (+)
G1895266 LOC106612719 other upstream 210767 5521415 ~ 5522865 (+)
G1894083 LOC106612398 other upstream 1288656 4444623 ~ 4444976 (+)
LOC118944093 NA other upstream 1392228 4336602 ~ 4341404 (+)
G1893604 NA other upstream 1443034 4289908 ~ 4290598 (+)
G1896894 NA other downstream 1206554 6940416 ~ 6941556 (+)
G1896931 NA other downstream 1283933 7017795 ~ 7018558 (+)
LOC110503629 LOC106612674 other downstream 1583090 7316925 ~ 7350759 (+)
LOC118944073 LOC106612646 other downstream 2342344 8076117 ~ 8080686 (+)
G1898300 NA other downstream 3623189 9357051 ~ 9359164 (+)

Expression


Co-expression Network