G1895853


Basic Information

Item Value
gene id G1895853
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 5869715 ~ 5943738 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2168633
cttgcatggagccccagaccgagggtgattgaccggcatcttgaacttcttccattttctaataattgtgccaacagttgttgccttctcacccagctgcttgcctattgtcctgtagcccatcccagccttgtgcaggtctacaattttatgtccttacacagctctctggtcttggccattgtggagaggttggagtctgtttgattgagtgtgtggacaggtgtctttaatacaggtaacgagttcaaacagGAGCACTTAAT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2168633 True 266 lncRNA 0.47 2 5869715 5943738

Neighbor

gene id symbol gene type direction distance location
bl1s3 bl1s3 coding upstream 349552 5518991 ~ 5520163 (+)
zgc:162730 tisb coding upstream 411364 5455761 ~ 5458351 (+)
LOC118944106 NA coding upstream 421681 5431459 ~ 5448034 (+)
LOC118944078 NA coding upstream 481916 5384458 ~ 5387799 (+)
tmprss4a LOC106612727 coding upstream 1106884 4743633 ~ 4762831 (+)
LOC110503583 LOC106612716 coding downstream 129849 6073587 ~ 6076625 (+)
LOC110503584 NA coding downstream 198665 6142403 ~ 6143853 (+)
LOC118944026 NA coding downstream 213102 6156840 ~ 6169793 (+)
LOC110503587 LOC106612711 coding downstream 341980 6285718 ~ 6356497 (+)
LOC110503588 LOC106612710 coding downstream 419319 6363057 ~ 6369858 (+)
G1895806 NA non-coding upstream 45870 5823638 ~ 5823845 (+)
G1895749 NA non-coding upstream 87539 5781968 ~ 5782176 (+)
G1895664 NA non-coding upstream 135853 5733632 ~ 5733862 (+)
G1895635 NA non-coding upstream 154150 5715363 ~ 5715565 (+)
G1895624 NA non-coding upstream 160467 5707646 ~ 5709248 (+)
G1895996 NA non-coding downstream 112906 6056644 ~ 6057537 (+)
G1896003 NA non-coding downstream 120009 6063747 ~ 6063982 (+)
G1896397 NA non-coding downstream 413533 6357271 ~ 6357486 (+)
G1896364 NA non-coding downstream 426401 6370139 ~ 6370333 (+)
G1896363 NA non-coding downstream 428207 6371945 ~ 6374057 (+)
G1895266 LOC106612719 other upstream 346850 5521415 ~ 5522865 (+)
G1894083 LOC106612398 other upstream 1424739 4444623 ~ 4444976 (+)
LOC118944093 NA other upstream 1528311 4336602 ~ 4341404 (+)
G1893604 NA other upstream 1579117 4289908 ~ 4290598 (+)
G1896894 NA other downstream 996678 6940416 ~ 6941556 (+)
G1896931 NA other downstream 1074057 7017795 ~ 7018558 (+)
LOC110503629 LOC106612674 other downstream 1373214 7316925 ~ 7350759 (+)
LOC118944073 LOC106612646 other downstream 2132468 8076117 ~ 8080686 (+)
G1898300 NA other downstream 3413313 9357051 ~ 9359164 (+)

Expression


Co-expression Network