Gene
RNA
| Item | Value |
|---|---|
| gene id | G1896003 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 6063747 ~ 6063982 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2168787 | True | 236 | lncRNA | 0.44 | 1 | 6063747 | 6063982 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503581 | LOC106612717 | coding | upstream | 30625 | 5874485 ~ 6033122 (+) |
| bl1s3 | bl1s3 | coding | upstream | 543584 | 5518991 ~ 5520163 (+) |
| zgc:162730 | tisb | coding | upstream | 605396 | 5455761 ~ 5458351 (+) |
| LOC118944106 | NA | coding | upstream | 615713 | 5431459 ~ 5448034 (+) |
| LOC118944078 | NA | coding | upstream | 675948 | 5384458 ~ 5387799 (+) |
| LOC110503583 | LOC106612716 | coding | downstream | 9605 | 6073587 ~ 6076625 (+) |
| LOC110503584 | NA | coding | downstream | 78421 | 6142403 ~ 6143853 (+) |
| LOC118944026 | NA | coding | downstream | 92858 | 6156840 ~ 6169793 (+) |
| LOC110503587 | LOC106612711 | coding | downstream | 221736 | 6285718 ~ 6356497 (+) |
| LOC110503588 | LOC106612710 | coding | downstream | 299075 | 6363057 ~ 6369858 (+) |
| G1895996 | NA | non-coding | upstream | 6210 | 6056644 ~ 6057537 (+) |
| G1895853 | NA | non-coding | upstream | 120009 | 5869715 ~ 5943738 (+) |
| G1895806 | NA | non-coding | upstream | 239902 | 5823638 ~ 5823845 (+) |
| G1895749 | NA | non-coding | upstream | 281571 | 5781968 ~ 5782176 (+) |
| G1896397 | NA | non-coding | downstream | 293289 | 6357271 ~ 6357486 (+) |
| G1896364 | NA | non-coding | downstream | 306157 | 6370139 ~ 6370333 (+) |
| G1896363 | NA | non-coding | downstream | 307963 | 6371945 ~ 6374057 (+) |
| G1896402 | LOC106612709 | non-coding | downstream | 311843 | 6375825 ~ 6376095 (+) |
| G1896403 | shkbp1 | non-coding | downstream | 312296 | 6376278 ~ 6377223 (+) |
| G1895266 | LOC106612719 | other | upstream | 540882 | 5521415 ~ 5522865 (+) |
| G1894083 | LOC106612398 | other | upstream | 1618771 | 4444623 ~ 4444976 (+) |
| LOC118944093 | NA | other | upstream | 1722343 | 4336602 ~ 4341404 (+) |
| G1893604 | NA | other | upstream | 1773149 | 4289908 ~ 4290598 (+) |
| G1896894 | NA | other | downstream | 876434 | 6940416 ~ 6941556 (+) |
| G1896931 | NA | other | downstream | 953813 | 7017795 ~ 7018558 (+) |
| LOC110503629 | LOC106612674 | other | downstream | 1252970 | 7316925 ~ 7350759 (+) |
| LOC118944073 | LOC106612646 | other | downstream | 2012224 | 8076117 ~ 8080686 (+) |
| G1898300 | NA | other | downstream | 3293069 | 9357051 ~ 9359164 (+) |
