G1896689


Basic Information

Item Value
gene id G1896689
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 6526730 ~ 6534653 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2169559
agccTATGTTTGTCTATATGCATAATCCTTGAGACTACAATATAATTCCGATATCCATGGCCTCCATCTATCCAACCCTTTCCACATCATCAGACGAAGGAGGGGCATATGTTATGTCAGCAATTAGTTTGTGACCGGGTAAAAATGACGGTATATATAGGCCCATATCAAACACAATACATTTTGCCCTACAGTTTGTAGTTAATTATGGCAGTCGTttattgtttttcattttttaagAGTGGGTGGTAGGCTATAGAATTGTGCAGCTCATGCTCTATCCACGACAATTGTCCCGTTATCTAATGATGCTGGGTTAGGCTTCCAAAGTTTTTACAGATTGAATTTCGAGCGTCTAAGTCATCCACCATAAAGATGAGATGCTGGTGTTACTGGACTCCTTAATGGAACAGAAAGACCCCGAAGATGACCTTACATACCAGTAAGGAGGAAGGATCTTGGTTTGTGTGACCAGTGGCTGGAGGATCTGCAAGCAAGTGATGGCAGCTGGAAGGACCATCTAAGCAAAGGATTGAAAAGGCATTGCGGAGGACCAGAGGATCAAAGCCCTGGTCTATTGACCAATCCTTTTTTCTTTttagaattttaccccttttctccccaatttcgtggtattcaattgttagtagttactatcttgtctcattgctacaactcccgtacgggctggggagagacaaaggtcgaaagccatgagtcctccaaaacacaacccaaccaagcctcactgcttcttaacacagctcccatccaacccggaagcaagcagcaccaatgtgtcggcggaaacaccgtgcacctggcgacctggttagcgtgcaatgcgcccggcccgccacaggagtcgctagtgcgtgatgagacaaggatatccctaccggccaaaccctccctaacccggacaactctAGGCCAATTAAGCATCACCCCATGGACCTCCGaccgcggccggctgcgacagagccttggctcgaacccagagtctctggtggcacagctagcactgcgatgcagtgccctagaccaatCCTTTCTAACACGATGTCCAGCACAAATCTATTATTGAGATGAGTAGCTCAGCCCAAAAAAGTAAAATCACTATTAACAATTTGTCCTGTTCATAGCAGTGAAAATGTTTACATTACTTGTTATAAACAGATTGTTTTGATGCAATTCTGTCACGTACACTATTAGTCATGTTTATGGAAATGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2169559 True 1233 lncRNA 0.46 3 6526730 6534653

Neighbor

gene id symbol gene type direction distance location
LOC110503595 LOC106612701 coding downstream 15709 6490652 ~ 6511021 (-)
LOC110503594 LOC106612702 coding downstream 42189 6477199 ~ 6484541 (-)
LOC110503593 LOC106612703 coding downstream 50768 6467605 ~ 6475962 (-)
LOC110503306 LOC106612708 coding downstream 70198 6385285 ~ 6456532 (-)
LOC110503590 LOC106612705 coding downstream 143276 6371958 ~ 6472758 (-)
LOC110503597 LOC106612700 coding upstream 3145 6537798 ~ 6544812 (-)
LOC110503598 LOC106612699 coding upstream 50096 6584749 ~ 6589001 (-)
LOC110503599 LOC106612697 coding upstream 62044 6596697 ~ 6601829 (-)
LOC110503601 LOC106612696 coding upstream 88892 6623545 ~ 6686837 (-)
LOC110503602 LOC106612694 coding upstream 164334 6698987 ~ 6735315 (-)
G1896678 NA non-coding downstream 37169 6489306 ~ 6489561 (-)
G1896677 NA non-coding downstream 39425 6487041 ~ 6487305 (-)
G1896676 NA non-coding downstream 39693 6486787 ~ 6487037 (-)
G1896673 NA non-coding downstream 41639 6484815 ~ 6485091 (-)
G1899070 NA non-coding upstream 11312 6545965 ~ 6546187 (-)
G1899075 NA non-coding upstream 14045 6548698 ~ 6548987 (-)
G1899080 NA non-coding upstream 17755 6552408 ~ 6552916 (-)
G1899082 NA non-coding upstream 19706 6554359 ~ 6554673 (-)
G1899083 NA non-coding upstream 21044 6555697 ~ 6555916 (-)
LOC118944082 NA other downstream 294922 6181377 ~ 6231808 (-)
G1896030 NA other downstream 657512 5868896 ~ 5869218 (-)
G1894611 NA other downstream 2172794 4353578 ~ 4353936 (-)
si:dkey-202l22.3 LOC106612399 other downstream 2232252 4289886 ~ 4294714 (-)
G1899875 NA other upstream 1512126 8046779 ~ 8047974 (-)
LOC110503680 LOC106612628 other upstream 3036218 9570867 ~ 9579939 (-)
G1901072 LOC107388308 other upstream 3470719 10005372 ~ 10012354 (-)
G1901206 NA other upstream 3670567 10205220 ~ 10205948 (-)
G1901302 LOC106612600 other upstream 3864389 10399042 ~ 10399857 (-)

Expression


Co-expression Network