G1899080


Basic Information

Item Value
gene id G1899080
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 6552408 ~ 6552916 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2172175
agagatcctaatGATGATAAGAAAATATACCAGGTTGATGAAAAATAACAAATGAGTCAGTCGGTGTGAGTTGTTTCTGAAGTCTCCCCTACATTGTCCTGTAGAAAATATTGTATGTGTTATCAAAAAATGTATTGAGACAAACGATTACAGCTATGTTTGACTTGAATACATCCAGCAAAGTGTCCTAAATTACATCAACTACAACTTCAGGCACTGTCTGTACTCATTAACCAAAACAGGAACACTCACCAAAGGTATGAGTACCACAGCGAGTCTCTGGTCAGGTGGTCACTGTGAGTCTGACATGATCTGCTGCATCGCAGGCTAGCTAGGCAGTTCAAAACAGAGCCAGGTGTTTGGCACAGATAAAAACATAATAAGTTAAACAGGTAGTATATGACTTATTTATAATGATGtttcattattatattatatgacATATATATAATGATGTTTCATTATTACAGCatgggaagtgagagagagagcgagagcgaaaaagagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2172175 True 509 lncRNA 0.37 1 6552408 6552916

Neighbor

gene id symbol gene type direction distance location
LOC110503597 LOC106612700 coding downstream 7596 6537798 ~ 6544812 (-)
LOC110503595 LOC106612701 coding downstream 41387 6490652 ~ 6511021 (-)
LOC110503594 LOC106612702 coding downstream 67867 6477199 ~ 6484541 (-)
LOC110503593 LOC106612703 coding downstream 76446 6467605 ~ 6475962 (-)
LOC110503306 LOC106612708 coding downstream 95876 6385285 ~ 6456532 (-)
LOC110503598 LOC106612699 coding upstream 31833 6584749 ~ 6589001 (-)
LOC110503599 LOC106612697 coding upstream 43781 6596697 ~ 6601829 (-)
LOC110503601 LOC106612696 coding upstream 70629 6623545 ~ 6686837 (-)
LOC110503602 LOC106612694 coding upstream 146071 6698987 ~ 6735315 (-)
LOC110503603 LOC106612693 coding upstream 204558 6757474 ~ 6795108 (-)
G1899075 NA non-coding downstream 3421 6548698 ~ 6548987 (-)
G1899070 NA non-coding downstream 6221 6545965 ~ 6546187 (-)
G1896689 NA non-coding downstream 17755 6526730 ~ 6534653 (-)
G1896678 NA non-coding downstream 62847 6489306 ~ 6489561 (-)
G1896677 NA non-coding downstream 65103 6487041 ~ 6487305 (-)
G1899082 NA non-coding upstream 1443 6554359 ~ 6554673 (-)
G1899083 NA non-coding upstream 2781 6555697 ~ 6555916 (-)
G1899085 NA non-coding upstream 6147 6559063 ~ 6559747 (-)
G1899093 NA non-coding upstream 14453 6567369 ~ 6572081 (-)
G1899158 NA non-coding upstream 141710 6694626 ~ 6695117 (-)
LOC110503590 LOC106612705 other downstream 92343 6371958 ~ 6472758 (-)
LOC118944082 NA other downstream 320600 6181377 ~ 6231808 (-)
G1896030 NA other downstream 683190 5868896 ~ 5869218 (-)
G1894611 NA other downstream 2198472 4353578 ~ 4353936 (-)
si:dkey-202l22.3 LOC106612399 other downstream 2257930 4289886 ~ 4294714 (-)
G1899875 NA other upstream 1493863 8046779 ~ 8047974 (-)
LOC110503680 LOC106612628 other upstream 3017955 9570867 ~ 9579939 (-)
G1901072 LOC107388308 other upstream 3452456 10005372 ~ 10012354 (-)
G1901206 NA other upstream 3652304 10205220 ~ 10205948 (-)
G1901302 LOC106612600 other upstream 3846126 10399042 ~ 10399857 (-)

Expression


Co-expression Network