Gene
RNA
| Item | Value |
|---|---|
| gene id | G1899082 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 6554359 ~ 6554673 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2172177 | True | 315 | lncRNA | 0.43 | 1 | 6554359 | 6554673 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503597 | LOC106612700 | coding | downstream | 9547 | 6537798 ~ 6544812 (-) |
| LOC110503595 | LOC106612701 | coding | downstream | 43338 | 6490652 ~ 6511021 (-) |
| LOC110503594 | LOC106612702 | coding | downstream | 69818 | 6477199 ~ 6484541 (-) |
| LOC110503593 | LOC106612703 | coding | downstream | 78397 | 6467605 ~ 6475962 (-) |
| LOC110503306 | LOC106612708 | coding | downstream | 97827 | 6385285 ~ 6456532 (-) |
| LOC110503598 | LOC106612699 | coding | upstream | 30076 | 6584749 ~ 6589001 (-) |
| LOC110503599 | LOC106612697 | coding | upstream | 42024 | 6596697 ~ 6601829 (-) |
| LOC110503601 | LOC106612696 | coding | upstream | 68872 | 6623545 ~ 6686837 (-) |
| LOC110503602 | LOC106612694 | coding | upstream | 144314 | 6698987 ~ 6735315 (-) |
| LOC110503603 | LOC106612693 | coding | upstream | 202801 | 6757474 ~ 6795108 (-) |
| G1899080 | NA | non-coding | downstream | 1443 | 6552408 ~ 6552916 (-) |
| G1899075 | NA | non-coding | downstream | 5372 | 6548698 ~ 6548987 (-) |
| G1899070 | NA | non-coding | downstream | 8172 | 6545965 ~ 6546187 (-) |
| G1896689 | NA | non-coding | downstream | 19706 | 6526730 ~ 6534653 (-) |
| G1896678 | NA | non-coding | downstream | 64798 | 6489306 ~ 6489561 (-) |
| G1899083 | NA | non-coding | upstream | 1024 | 6555697 ~ 6555916 (-) |
| G1899085 | NA | non-coding | upstream | 4390 | 6559063 ~ 6559747 (-) |
| G1899093 | NA | non-coding | upstream | 12696 | 6567369 ~ 6572081 (-) |
| G1899158 | NA | non-coding | upstream | 139953 | 6694626 ~ 6695117 (-) |
| G1899160 | NA | non-coding | upstream | 140723 | 6695396 ~ 6697633 (-) |
| LOC110503590 | LOC106612705 | other | downstream | 94294 | 6371958 ~ 6472758 (-) |
| LOC118944082 | NA | other | downstream | 322551 | 6181377 ~ 6231808 (-) |
| G1896030 | NA | other | downstream | 685141 | 5868896 ~ 5869218 (-) |
| G1894611 | NA | other | downstream | 2200423 | 4353578 ~ 4353936 (-) |
| si:dkey-202l22.3 | LOC106612399 | other | downstream | 2259881 | 4289886 ~ 4294714 (-) |
| G1899875 | NA | other | upstream | 1492106 | 8046779 ~ 8047974 (-) |
| LOC110503680 | LOC106612628 | other | upstream | 3016198 | 9570867 ~ 9579939 (-) |
| G1901072 | LOC107388308 | other | upstream | 3450699 | 10005372 ~ 10012354 (-) |
| G1901206 | NA | other | upstream | 3650547 | 10205220 ~ 10205948 (-) |
| G1901302 | LOC106612600 | other | upstream | 3844369 | 10399042 ~ 10399857 (-) |
