Gene
RNA
| Item | Value |
|---|---|
| gene id | G1899339 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 6961636 ~ 6962054 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: LOW QUALITY PROTEIN: RNA-directed DNA polymerase from mobile element jockey-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2172461 | True | 419 | lncRNA | 0.42 | 1 | 6961636 | 6962054 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503307 | LOC106612692 | coding | downstream | 52902 | 6901464 ~ 6908734 (-) |
| LOC110503603 | LOC106612693 | coding | downstream | 166528 | 6757474 ~ 6795108 (-) |
| LOC110503602 | LOC106612694 | coding | downstream | 226321 | 6698987 ~ 6735315 (-) |
| LOC110503601 | LOC106612696 | coding | downstream | 274799 | 6623545 ~ 6686837 (-) |
| LOC110503599 | LOC106612697 | coding | downstream | 359807 | 6596697 ~ 6601829 (-) |
| zgc:162698 | LOC106612685 | coding | upstream | 12704 | 6974758 ~ 6986323 (-) |
| LOC110503623 | LOC106612682 | coding | upstream | 158592 | 7120646 ~ 7123814 (-) |
| LOC110503619 | LOC106580766 | coding | upstream | 166855 | 7128909 ~ 7150382 (-) |
| LOC110503624 | NA | coding | upstream | 195960 | 7158014 ~ 7184067 (-) |
| LOC110503626 | LOC106612677 | coding | upstream | 231916 | 7193970 ~ 7256664 (-) |
| G1899338 | NA | non-coding | downstream | 664 | 6960702 ~ 6960972 (-) |
| G1899331 | NA | non-coding | downstream | 18137 | 6943194 ~ 6943499 (-) |
| G1899282 | NA | non-coding | downstream | 79527 | 6881512 ~ 6882109 (-) |
| G1899280 | NA | non-coding | downstream | 80562 | 6880861 ~ 6881074 (-) |
| G1899277 | NA | non-coding | downstream | 83589 | 6877837 ~ 6878047 (-) |
| G1899340 | NA | non-coding | upstream | 618 | 6962672 ~ 6962940 (-) |
| G1899350 | NA | non-coding | upstream | 27665 | 6989719 ~ 7010493 (-) |
| G1899454 | NA | non-coding | upstream | 230092 | 7192146 ~ 7192350 (-) |
| LOC110503590 | LOC106612705 | other | downstream | 501571 | 6371958 ~ 6472758 (-) |
| LOC118944082 | NA | other | downstream | 729828 | 6181377 ~ 6231808 (-) |
| G1896030 | NA | other | downstream | 1092418 | 5868896 ~ 5869218 (-) |
| G1894611 | NA | other | downstream | 2607700 | 4353578 ~ 4353936 (-) |
| si:dkey-202l22.3 | LOC106612399 | other | downstream | 2667158 | 4289886 ~ 4294714 (-) |
| G1899875 | NA | other | upstream | 1084725 | 8046779 ~ 8047974 (-) |
| LOC110503680 | LOC106612628 | other | upstream | 2608817 | 9570867 ~ 9579939 (-) |
| G1901072 | LOC107388308 | other | upstream | 3043318 | 10005372 ~ 10012354 (-) |
| G1901206 | NA | other | upstream | 3243166 | 10205220 ~ 10205948 (-) |
| G1901302 | LOC106612600 | other | upstream | 3436988 | 10399042 ~ 10399857 (-) |
