G1896931


Basic Information

Item Value
gene id G1896931
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 7017795 ~ 7018558 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2169820
atcaagtctctgtataaatgcacctgcactgtgatagtctcagaggtccgtcaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccagatttggatacaaaaagatttcccaagatttaaaaatcccaaggagcactgtgcaaacgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctgtccgtccctctaaactttcagctcattcaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatatggcctttattgaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgtctttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaacgtggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactggg

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2169820 True 739 TUCP 0.45 2 7017795 7018558

Neighbor

gene id symbol gene type direction distance location
LOC110503612 LOC106612687 coding upstream 26767 6986712 ~ 6991028 (+)
LOC110503611 LOC106612686 coding upstream 43838 6964365 ~ 6973957 (+)
LOC110503308 LOC106612688 coding upstream 64724 6947878 ~ 6953071 (+)
LOC110503608 LOC106612689 coding upstream 84900 6915343 ~ 6932895 (+)
LOC110503606 LOC106612691 coding upstream 121249 6859036 ~ 6896546 (+)
trnar-ucg-5 NA coding downstream 4032 7022590 ~ 7022662 (+)
LOC110503613 LOC100194580 coding downstream 4417 7022975 ~ 7026660 (+)
LOC110503615 LOC106580762 coding downstream 8117 7026675 ~ 7029192 (+)
LOC110503617 LOC106612684 coding downstream 11411 7029969 ~ 7063089 (+)
LOC110503618 LOC106612683 coding downstream 52432 7070990 ~ 7076958 (+)
G1896929 NA non-coding upstream 5192 7012400 ~ 7012603 (+)
G1896888 NA non-coding upstream 84555 6932955 ~ 6933240 (+)
G1896879 NA non-coding upstream 102787 6914760 ~ 6915008 (+)
G1896878 NA non-coding upstream 103250 6914304 ~ 6914545 (+)
G1896875 NA non-coding upstream 108352 6909212 ~ 6909443 (+)
G1896985 NA non-coding downstream 79888 7098446 ~ 7160964 (+)
G1897010 NA non-coding downstream 175004 7193562 ~ 7193766 (+)
G1897050 NA non-coding downstream 244517 7263075 ~ 7286921 (+)
G1897090 NA non-coding downstream 314616 7333174 ~ 7335630 (+)
G1897093 NA non-coding downstream 319033 7337591 ~ 7337796 (+)
G1896894 NA other upstream 76239 6940416 ~ 6941556 (+)
G1895266 LOC106612719 other upstream 1494930 5521415 ~ 5522865 (+)
bl1s3 bl1s3 other upstream 1497763 5518991 ~ 5520163 (+)
G1894083 LOC106612398 other upstream 2572819 4444623 ~ 4444976 (+)
LOC118944093 NA other upstream 2676391 4336602 ~ 4341404 (+)
LOC110503629 LOC106612674 other downstream 298394 7316925 ~ 7350759 (+)
LOC118944073 LOC106612646 other downstream 1057648 8076117 ~ 8080686 (+)
G1898300 NA other downstream 2338493 9357051 ~ 9359164 (+)
G1898315 cep164 other downstream 2424736 9443294 ~ 9444057 (+)
G1898293 LOC106612633 other downstream 2501374 9519932 ~ 9525546 (+)

Expression


Co-expression Network